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Description
The input file is as follows:
agent.ic_type = "census"
agent.census_filename = "MA.dat"
agent.workerflow_filename = "MA-wf.dat"
agent.nsteps = 70
agent.plot_int = 10
agent.random_travel_int = 24
agent.aggregated_diag_int = 1
agent.aggregated_diag_prefix = "cases"
disease.initial_case_type = "file"
disease.case_filename = "July4.cases"
with the July4.cases, MA.dat and MA-wf.dat copied from repo to the local directory.
I am running it on LLNL/LC/Dane (MPI-only, no CUDA) with 20 MPI ranks (domain as 20 boxes). The simulation freezes while infecting the agents. Here is the screen output:
Initializing AMReX (25.02-9-g198da4879a63)...
MPI initialized with 20 MPI processes
MPI initialized with thread support level 0
OMP initialized with 1 OMP threads
AMReX (25.02-9-g198da4879a63) initialized
ExaEpi version v0.0.1-gd3612d4 (development) (built on Feb 10 2025)
Tracking 1 diseases:
default00
Total pop 6349097
Total workers 3051251
Number of communities: 4106
Base domain is: ((0,0) (64,63) (0,0))
Max box size is: 16
Number of boxes is: 20 over 20 ranks.
Added 6 real-type run-time SoA attibute(s).
Added 2 integer-type run-time SoA attibute(s).
Setting initial case counts for default00 in 2630 disease hubs.
Initializing infections for default00
Attempting to infect: 19 people in FIPS 25001... infected 20 (total 20) after processing.
Attempting to infect: 7 people in FIPS 25003... infected 10 (total 30) after processing.
Attempting to infect: 95 people in FIPS 25005... infected 95 (total 125) after processing.
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