Journal-Utilities/pyproject.toml at main · ActiveInferenceInstitute/Journal-Utilities · GitHub

1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
[project]
name = "journal-utilities"
version = "0.1.0"
description = "Transcription, entity extraction, and processing pipeline for the Active Inference Journal"
readme = "README.md"
requires-python = ">=3.12"
license = "MIT"
authors = [
    { name = "Holly Grimm", email = "Holly@ActiveInference.Institute" },
    { name = "Daniel Ari Friedman", email = "Daniel@ActiveInference.Institute" },
    { name = "Active Inference Institute" }
]

dependencies = [
    # Transcription pipeline (includes PyTorch with CUDA 12.8 support)
    "whisperx @ git+https://github.com/m-bain/whisperX.git",
    "yt-dlp>=2025.9.26",
    "numpy>=2.0.2",
    "pandas>=2.2.3",
    "omegaconf>=2.3.0",
    "pyytdata>=0.1.0",
    # Entity extraction (JournalRAG)
    "cohere>=5.11.0",
    "pydantic>=2.6.0",
    "pydantic-settings>=2.1.0",
    "structlog>=25.5.0",
    "rich>=14.2.0",
    # Shared dependencies
    "python-dotenv>=1.0.0",
    "surrealdb>=1.0.6",
    # YouTube channel download
    "youtube-transcript-api>=0.6.0",
]

[project.optional-dependencies]
transcribe-local = [
    "mlx-whisper>=0.4.0",
]
interface = [
    "fastapi>=0.115.0",
    "uvicorn[standard]>=0.34.0",
    "httpx>=0.28.0",
]
export = [
    "fpdf2>=2.8.0",
]
dev = [
    "pytest>=8.4.2",
    "pytest-asyncio>=1.2.0",
    "pytest-cov>=7.0.0",
    "black>=25.9.0",
    "ruff>=0.2.0",
    "mypy>=1.8.0",
    "ipython>=9.6.0",
]

[project.scripts]
journal-ui = "journal_utilities.interface.app:main"

[build-system]
requires = ["hatchling"]
build-backend = "hatchling.build"

[tool.hatch.metadata]
allow-direct-references = true

[tool.hatch.build.targets.wheel]
packages = ["src/journal_utilities"]

[dependency-groups]
dev = [
    "ipython>=9.5.0",
]

[tool.black]
line-length = 100
target-version = ["py312"]

[tool.ruff]
line-length = 100
target-version = "py312"
src = ["src"]

[tool.ruff.lint]
select = [
    "E",   # pycodestyle errors
    "W",   # pycodestyle warnings
    "F",   # pyflakes
    "I",   # isort
    "N",   # pep8-naming
    "UP",  # pyupgrade
    "ANN", # flake8-annotations
    "B",   # flake8-bugbear
    "A",   # flake8-builtins
]

[tool.ruff.lint.per-file-ignores]
"tests/*" = ["ANN"]

[tool.pytest.ini_options]
testpaths = ["tests"]
asyncio_mode = "auto"
python_files = ["test_*.py"]
addopts = "-v --cov=src --cov-report=term-missing"

[tool.mypy]
python_version = "3.12"
strict = true
warn_return_any = true
warn_unused_configs = true
disallow_untyped_defs = true