diff --git a/python/CAISA1-eye80.png b/python/CAISA1-eye80.png new file mode 100644 index 0000000..daaefd3 Binary files /dev/null and b/python/CAISA1-eye80.png differ diff --git a/python/CASIA1-optimal.png b/python/CASIA1-optimal.png new file mode 100644 index 0000000..4967645 Binary files /dev/null and b/python/CASIA1-optimal.png differ diff --git a/python/evaluate_casia1.py b/python/archive/calculate_dist_mat_casia1.py similarity index 91% rename from python/evaluate_casia1.py rename to python/archive/calculate_dist_mat_casia1.py index c0fe78f..4a12aa4 100644 --- a/python/evaluate_casia1.py +++ b/python/archive/calculate_dist_mat_casia1.py @@ -19,9 +19,9 @@ #------------------------------------------------------------------------------ # Parameters #------------------------------------------------------------------------------ -MMU2_DIR = "/home/antiaegis/Downloads/Iris-Recognition/MMU2" +CASIA1_DIR = "/home/antiaegis/Downloads/Iris-Recognition/CASIA1" EYELASHES_THRES = 80 -N_IMAGES = 2 +N_IMAGES = 4 #------------------------------------------------------------------------------ @@ -51,7 +51,7 @@ def pool_func_calHammingDist(args): # Main execution #------------------------------------------------------------------------------ # Get identities of MMU2 dataset -identities = glob(os.path.join(MMU2_DIR, "**")) +identities = glob(os.path.join(CASIA1_DIR, "**")) identities = sorted([os.path.basename(identity) for identity in identities]) n_identities = len(identities) print("Number of identities:", n_identities) @@ -61,11 +61,7 @@ def pool_func_calHammingDist(args): files_dict = {} image_files = [] for identity in identities: - # Because the 50th identity has only 5 images, skip it - if identity=="50": - continue - - files = glob(os.path.join(MMU2_DIR, identity, "*.bmp")) + files = glob(os.path.join(CASIA1_DIR, identity, "*.*")) shuffle(files) files_dict[identity] = files[:N_IMAGES] # print("Identity %s: %d images" % (identity, len(files_dict[identity]))) @@ -113,7 +109,7 @@ def pool_func_calHammingDist(args): elif i>j: dist_mat[i, j] = dist_mat[j, i] -np.save("dist_mat.npy", dist_mat) +np.save("dist_mat_casia1.npy", dist_mat) plt.figure() plt.imshow(dist_mat) diff --git a/python/archive/eval_thres_casia1.py b/python/archive/eval_thres_casia1.py new file mode 100644 index 0000000..c4bef61 --- /dev/null +++ b/python/archive/eval_thres_casia1.py @@ -0,0 +1,52 @@ +#------------------------------------------------------------------------------ +# Libraries +#------------------------------------------------------------------------------ +import numpy as np +from time import time +from matplotlib import pyplot as plt +from itertools import repeat +from multiprocessing import Pool, cpu_count + + +#------------------------------------------------------------------------------ +# Parameters +#------------------------------------------------------------------------------ +DIST_MAT_FILE = "/home/antiaegis/Downloads/Iris-Recognition/dist_mat_casia1.npy" +THRESHOLDS = np.linspace(start=0.0, stop=1.0, num=100) +NUM_IMAGES = 4 + + +#------------------------------------------------------------------------------ +# Main execution +#------------------------------------------------------------------------------ +dist_mat = np.load(DIST_MAT_FILE) + +ground_truth = np.zeros_like(dist_mat, dtype=int) +for i in range(ground_truth.shape[0]): + for j in range(ground_truth.shape[1]): + if i//NUM_IMAGES == j//NUM_IMAGES: + ground_truth[i, j] = 1 + +accuracies, precisions, recalls, fscores = [], [], [], [] +for threshold in THRESHOLDS: + decision_map = (dist_mat<=threshold).astype(int) + accuracy = (decision_map==ground_truth).sum() / ground_truth.size + precision = (ground_truth*decision_map).sum() / decision_map.sum() + recall = (ground_truth*decision_map).sum() / ground_truth.sum() + fscore = 2*precision*recall / (precision+recall) + accuracies.append(accuracy) + precisions.append(precision) + recalls.append(recall) + fscores.append(fscore) + +print("Max fscore:", max(fscores)) +print("Best threshold:", THRESHOLDS[fscores.index(max(fscores))]) + +plt.figure() +plt.plot(THRESHOLDS, accuracies, "-or") +plt.plot(THRESHOLDS, precisions, "-vb") +plt.plot(THRESHOLDS, recalls, "-*g") +plt.plot(THRESHOLDS, fscores, "-sc") +plt.legend(["accuracy", "precision", "recall", "fscore"]) +plt.grid(True) +plt.show() \ No newline at end of file diff --git a/python/evaluate_mmu2.py b/python/archive/evaluate_mmu2.py similarity index 100% rename from python/evaluate_mmu2.py rename to python/archive/evaluate_mmu2.py diff --git a/python/eval_casia1.py b/python/eval_casia1.py new file mode 100644 index 0000000..61612c2 --- /dev/null +++ b/python/eval_casia1.py @@ -0,0 +1,135 @@ +#------------------------------------------------------------------------------ +# Libraries +#------------------------------------------------------------------------------ +import os +import numpy as np +from glob import glob +from tqdm import tqdm +from random import shuffle +from itertools import repeat +from collections import defaultdict +from multiprocessing import Pool, cpu_count + +from fnc.extractFeature import extractFeature +from fnc.matching import calHammingDist + + +#------------------------------------------------------------------------------ +# Parameters +#------------------------------------------------------------------------------ +CASIA1_DIR = "/home/antiaegis/Downloads/Iris-Recognition/CASIA1" +N_IMAGES = 4 + +eyelashes_thresholds = np.linspace(start=10, stop=250, num=25) +thresholds = np.linspace(start=0.0, stop=1.0, num=100) + + +#------------------------------------------------------------------------------ +# Pool function of extracting feature +#------------------------------------------------------------------------------ +def pool_func_extract_feature(args): + im_filename, eyelashes_thres, use_multiprocess = args + + template, mask, im_filename = extractFeature( + im_filename=im_filename, + eyelashes_thres=eyelashes_thres, + use_multiprocess=use_multiprocess, + ) + return template, mask, im_filename + + +#------------------------------------------------------------------------------ +# Pool function of calculating Hamming distance +#------------------------------------------------------------------------------ +def pool_func_calHammingDist(args): + template1, mask1, template2, mask2 = args + dist = calHammingDist(template1, mask1, template2, mask2) + return dist + + +#------------------------------------------------------------------------------ +# Main execution +#------------------------------------------------------------------------------ +# Get identities of MMU2 dataset +identities = glob(os.path.join(CASIA1_DIR, "**")) +identities = sorted([os.path.basename(identity) for identity in identities]) +n_identities = len(identities) +print("Number of identities:", n_identities) + + +# Construct a dictionary of files +files_dict = {} +image_files = [] +for identity in identities: + files = glob(os.path.join(CASIA1_DIR, identity, "*.*")) + shuffle(files) + files_dict[identity] = files[:N_IMAGES] + image_files += files[:N_IMAGES] + +n_image_files = len(image_files) +print("Number of image files:", n_image_files) + + +# Ground truth +ground_truth = np.zeros([n_image_files, n_image_files], dtype=int) +for i in range(ground_truth.shape[0]): + for j in range(ground_truth.shape[1]): + if i//N_IMAGES == j//N_IMAGES: + ground_truth[i, j] = 1 + + +# Evaluate parameters +pools = Pool(processes=cpu_count()) +best_results = [] +for eye_threshold in tqdm(eyelashes_thresholds, total=len(eyelashes_thresholds)): + # Extract features + args = zip(image_files, repeat(eye_threshold), repeat(False)) + features = list(pools.map(pool_func_extract_feature, args)) + + # Calculate the distances + args = [] + for i in range(n_image_files): + for j in range(n_image_files): + if i>=j: + continue + arg = (features[i][0], features[i][1], features[j][0], features[j][1]) + args.append(arg) + distances = pools.map(pool_func_calHammingDist, args) + + # Construct a distance matrix + k = 0 + dist_mat = np.zeros([n_image_files, n_image_files]) + for i in range(n_image_files): + for j in range(n_image_files): + if ij: + dist_mat[i, j] = dist_mat[j, i] + + # Metrics + accuracies, precisions, recalls, fscores = [], [], [], [] + for threshold in thresholds: + decision_map = (dist_mat<=threshold).astype(int) + accuracy = (decision_map==ground_truth).sum() / ground_truth.size + precision = (ground_truth*decision_map).sum() / decision_map.sum() + recall = (ground_truth*decision_map).sum() / ground_truth.sum() + fscore = 2*precision*recall / (precision+recall) + accuracies.append(accuracy) + precisions.append(precision) + recalls.append(recall) + fscores.append(fscore) + + # Save the best result + best_fscore = max(fscores) + best_threshold = thresholds[fscores.index(best_fscore)] + best_results.append((eye_threshold, best_threshold, best_fscore)) + +# Show the final 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