Skip to content

Commit b64bc8b

Browse files
committed
Learnrs module 3 ready
1 parent 301d083 commit b64bc8b

File tree

5 files changed

+89
-6
lines changed

5 files changed

+89
-6
lines changed

DESCRIPTION

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -1,5 +1,5 @@
11
Package: BioDataScience1
2-
Version: 2025.2.0
2+
Version: 2025.3.0
33
Title: A Series of Learnr Documents for Biological Data Science 1
44
Description: Interactive documents using learnr and shiny applications for studying biological data science.
55
Authors@R: c(

NEWS.md

Lines changed: 4 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -1,3 +1,7 @@
1+
# BioDataScience1 2025.3.0
2+
3+
- Learnrs **A03La_barplot**, **A03Lb_boxplot** and **A03Lc_comp_fig** revised for 2025-2026.
4+
15
# BioDataScience1 2025.2.0
26

37
- Learnrs **A02La_progression**, **A02Lb_univariate** and **A02Lc_git** revised for 2025-2026.

inst/tutorials/A03La_barplot/A03La_barplot.Rmd.inactivated renamed to inst/tutorials/A03La_barplot/A03La_barplot.Rmd

Lines changed: 28 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -17,9 +17,35 @@ runtime: shiny_prerendered
1717
```{r setup, include=FALSE}
1818
BioDataScience1::learnr_setup()
1919
SciViews::R()
20+
# Required for RSConnect
21+
# SciViews::R
22+
library(rlang)
23+
library(data.table)
24+
library(ggplot2)
25+
library(tibble)
26+
library(tidyr)
27+
library(dplyr)
28+
library(dtplyr)
29+
library(broom)
30+
library(forcats)
31+
library(collapse)
32+
library(fs)
33+
library(data.trame)
34+
library(svFast)
35+
library(svTidy)
36+
library(svMisc)
37+
library(svBase)
38+
library(svFlow)
39+
library(data.io)
40+
library(chart)
41+
library(tabularise)
42+
library(SciViews)
43+
# ... more
44+
library(readxl)
45+
library(testthat)
46+
library(equatags)
2047
library(BioDataScience)
21-
22-
# Dataset
48+
# Datasets
2349
set.seed(2710)
2450
e_mathaei <- dtx(
2551
id = 1:345,

inst/tutorials/A03Lb_boxplot/A03Lb_boxplot.Rmd.inactivated renamed to inst/tutorials/A03Lb_boxplot/A03Lb_boxplot.Rmd

Lines changed: 27 additions & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -17,8 +17,34 @@ runtime: shiny_prerendered
1717
```{r setup, include=FALSE}
1818
BioDataScience1::learnr_setup()
1919
SciViews::R()
20+
# Required for RSConnect
21+
# SciViews::R
22+
library(rlang)
23+
library(data.table)
24+
library(ggplot2)
25+
library(tibble)
26+
library(tidyr)
27+
library(dplyr)
28+
library(dtplyr)
29+
library(broom)
30+
library(forcats)
31+
library(collapse)
32+
library(fs)
33+
library(data.trame)
34+
library(svFast)
35+
library(svTidy)
36+
library(svMisc)
37+
library(svBase)
38+
library(svFlow)
39+
library(data.io)
40+
library(chart)
41+
library(tabularise)
42+
library(SciViews)
43+
# ... more
44+
library(readxl)
45+
library(testthat)
46+
library(equatags)
2047
library(BioDataScience)
21-
2248
# Dataset
2349
crabs <- read("crabs", package = "MASS", lang = "fr")
2450
```

inst/tutorials/A03Lc_comp_fig/A03Lc_comp_fig.Rmd.inactivated renamed to inst/tutorials/A03Lc_comp_fig/A03Lc_comp_fig.Rmd

Lines changed: 29 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -17,9 +17,36 @@ runtime: shiny_prerendered
1717
```{r setup, include=FALSE}
1818
BioDataScience1::learnr_setup()
1919
SciViews::R()
20+
# Required for RSConnect
21+
# SciViews::R
22+
library(rlang)
23+
library(data.table)
24+
library(ggplot2)
25+
library(tibble)
26+
library(tidyr)
27+
library(dplyr)
28+
library(dtplyr)
29+
library(broom)
30+
library(forcats)
31+
library(collapse)
32+
library(fs)
33+
library(data.trame)
34+
library(svFast)
35+
library(svTidy)
36+
library(svMisc)
37+
library(svBase)
38+
library(svFlow)
39+
library(data.io)
40+
library(chart)
41+
library(tabularise)
42+
library(SciViews)
43+
# ... more
44+
library(readxl)
45+
library(testthat)
46+
library(equatags)
2047
library(BioDataScience)
21-
22-
# Dataset
48+
library(pastecs)
49+
# Datasets
2350
e_mathaei <- data_frame(
2451
id = 1:345,
2552
variety = c(rep("black", times = 236L), rep("purple" , times = 40L),

0 commit comments

Comments
 (0)