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README.md

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@@ -63,7 +63,8 @@ And the the Uniref90 database download will take about 40 minutes to 70 minutes,
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### Parameter Description of the CDPred prediction script.
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**Command**:
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>`python CDPred_Installation_Path/lib/Model_predict.py -n [name] -p [pdb_file_list] -a [a3m_file] -m [model_option] -o [out_path]`
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>`python CDPred_Installation_Path/lib/Model_predict.py -n [name] -p [pdb_file_list] -a [a3m_file] -m [model_option] -o [out_path]`
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**Parameters**:
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>`-n` – The name of the protein complex, can be protein ID or custom name.
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>`-p` – The predicted monomer tertiary structure file or files with ".pdb" suffix. For homodimer inter-chain distance prediction, one predicted monomer structure file is enough. For heterodimer inter-chain distance prediction, both chains' predicted monomer structure files are required and needed to seperate by one space (Check the detail in [Demo](#demo) section).
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## Evaluation on a Small Dataset
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**Command**:
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>`python CDPred_Installation_Path/lib/distmap_evaluate.py -p [pred_map] -t [true_map] -f1 [fasta_file1] -f2 [fasta_file2]`
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**Parameters**:
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>`-p` – The prediction contact map with '.htxt' suffix.
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>`-t` – The nativate distance/contact map with '.htxt' suffix.

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