Technical + design review, copy-editing after accept: The Text Analysis Prototype for Galileo's Library and Letters Online: GaLiLeO

[inactinique]

PID: FYjDViXVXggz
Github jdh-observer repo: https://github.com/jdh-observer/FYjDViXVXggz
Github author repo: https://github.com/crystaljhall/GaLiLeO_JDH/tree/master

@eliselavy

[eliselavy]

No merge to do :
Sent to peer-review in august #172 (comment)
no change in the repo : https://github.com/crystaljhall/GaLiLeO_JDH/commits/master/The-Text-Analysis-Prototype-for-Galileo's-Library-and-Letters-Online-(GaLiLeO).ipynb

Sent to copy-editing

[eliselavy]

@biumiamy copy-editing to insert https://github.com/jdh-observer/FYjDViXVXggz/blob/master/FYjDViXVXggz%20Galileo%20Library%20AOD%20language%20check.docx

[biumiamy]

copyediting done, PR merged

[biumiamy]

For the design review already:

• this author keeps having the references in brackets at the beginning of the sentence. I think it might be connected to the previous sentence though? @inactinique

[biumiamy]

Is this an anchor to figure 3? or is it linked to the figure below (which is figure 2 though..)

[biumiamy]

would be nice to have an interactive chart instead of a static one (but I guess the tool (Galileo) the author uses only provides static img?

[biumiamy]

maybe show this in a table with 3 columns to save space and make it more readable? any other form of visualization would be beneficial for the reader

[biumiamy]

@biumiamy will make an alternative suggestion for the stop words

[biumiamy]

Btw he refers to a section.. which one is it? then I can add an anchor

[biumiamy]

can add an anchor here too

[biumiamy]

in fact all figures keep being mentioned.. but I dont know if the reference is still correct always. I think they are all -1

[biumiamy]

Okay, I found the information in the author's repo 👍

[biumiamy]

and more section mentioning:

[biumiamy]

and in the author's original repo ipynb are the sections:

[biumiamy]

How can I edit sth when the notebook is in R?

I would like to try this:

# Sort the stop words alphabetically
sorted_stop_words <- sort(stop_words, decreasing = FALSE)

# Define the number of columns (e.g., 4)
num_cols <- 4

# Convert into a matrix to format it in multiple columns
stop_words_matrix <- matrix(
sorted_stop_words,
ncol = num_cols,
byrow = TRUE
)

# Convert to tibble for better formatting
stop_words_tibble <- as_tibble(stop_words_matrix)

# Rename columns for readability
colnames(stop_words_tibble) <- paste("Column", 1:num_cols)

# Print in Markdown format for Jupyter Notebook
knitr::kable(stop_words_tibble, format = "markdown")

[eliselavy]

How can I edit sth when the notebook is in R?

I would like to try this:

# Sort the stop words alphabetically sorted_stop_words <- sort(stop_words, decreasing = FALSE)

Define the number of columns (e.g., 4)

num_cols <- 4

Convert into a matrix to format it in multiple columns

stop_words_matrix <- matrix( sorted_stop_words, ncol = num_cols, byrow = TRUE )

Convert to tibble for better formatting

stop_words_tibble <- as_tibble(stop_words_matrix)

Rename columns for readability

colnames(stop_words_tibble) <- paste("Column", 1:num_cols)

Print in Markdown format for Jupyter Notebook

knitr::kable(stop_words_tibble, format = "markdown")``

@biumiamy used the docker stack for R https://github.com/C2DH/journal-of-digital-history-jupyter-stack?tab=readme-ov-file#for-rs-user or launch via mybinder and execute and downlaod the notebook after .

[eliselavy]

Problem with mybinder

unable to find user jovyan: no matching entries in passwd file
------
 > [7/8] RUN chmod -R u+w /home/jovyan:
------
Dockerfile:29
--------------------
  27 |     
  28 |     # Set permissions for the notebook files
  29 | >>> RUN chmod -R u+w /home/${NB_USER}
  30 |     
  31 |     # Ensure the .ipynb_checkpoints directory exists and has the correct permissions
--------------------
ERROR: failed to solve: process "/bin/sh -c chmod -R u+w /home/${NB_USER}" did not complete successfully: unable to find user jovyan: no matching entries in passwd file
Error during build: Command '['docker', 'buildx', 'build', '--progress', 'plain', '--push', '--build-arg', 'NB_USER=jovyan', '--build-arg', 'NB_UID=1000', '--file', 'Dockerfile', '--tag', 'registry.2i2c.mybinder.org/i-jdh-2dobserver-2dfyjdvixvxggz-a9dda8:8d0fadc53d5675dd306b0dd234cac00e100a529e', '--label', 'repo2docker.version=2024.07.0+159.gd0ddd2e', '--label', 'repo2docker.repo=https://github.com/jdh-observer/FYjDViXVXggz', '--label', 'repo2docker.ref=8d0fadc53d5675dd306b0dd234cac00e100a529e', '--platform', 'linux/amd64', '/tmp/repo2dockervxe9u3gd']' returned non-zero exit status 1.

[eliselavy]

@biumiamy by using the anaconda distribution now by default there is Python and R kernel

[biumiamy]

Okay I see thx! I will give each a shot :D