From 062b6241db295ef2f09ad00dc35f3643bbcf50a1 Mon Sep 17 00:00:00 2001 From: Nadia Martins Date: Mon, 19 Aug 2024 15:26:08 +0100 Subject: [PATCH 01/10] update licenses --- licenses/check_licenses.yml | 57 +++++++++++++ licenses/update_licenses.py | 154 ++++++++++++++++++++++++++++++++++++ 2 files changed, 211 insertions(+) create mode 100644 licenses/check_licenses.yml create mode 100644 licenses/update_licenses.py diff --git a/licenses/check_licenses.yml b/licenses/check_licenses.yml new file mode 100644 index 0000000000..e6bb655816 --- /dev/null +++ b/licenses/check_licenses.yml @@ -0,0 +1,57 @@ +name: Check and update licenses + +on: + push: + branches: + - main + pull_request: + branches: + - main + +jobs: + license_update: + runs-on: ubuntu-latest + + steps: + - name: Checkout repository + uses: actions/checkout@v3 + + - name: Set up Python + uses: actions/setup-python@v4 + with: + python-version: '3.X' + + - name: Run license script and generate patch + env: + GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} + run: | + python update_licenses.py --source=pypi TensorFlow + python update_licenses.py --source=github:easybuilders/easybuild EasyBuild + if [ -f license_update.patch ] && [ -s license_update.patch ]; then + PATCH_CONTENT=$(cat license_update.patch) + echo "patch=$PATCH_CONTENT" >> $GITHUB_OUTPUT + fi + + - name: Create a PR (if changes detected) + uses: peter-evans/create-pull-request@v5 + if: steps.check_licenses.outputs.patch != '' + with: + commit-message: "Auto PR: Update licenses" + title: "Auto PR: Update licenses" + body: ${{ steps.check_licenses.outputs.patch }} + branch: main #fork branch + base: main #specify right brancg here + + - name: Apply patch (if no PR created) + if: steps.create_pull_request.outputs.pull-request-number == '' && steps.check_licenses.outputs.patch != '' + run: | + if [ -f license_update.patch ] && [ -s license_update.patch ]; then + git apply license_update.patch + else + echo "No changes to apply" + fi + git add licenses.json + git diff --cached --exit-code || git commit -m "Update licenses.json" + git push + env: + GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} diff --git a/licenses/update_licenses.py b/licenses/update_licenses.py new file mode 100644 index 0000000000..d4b898e24c --- /dev/null +++ b/licenses/update_licenses.py @@ -0,0 +1,154 @@ +import requests +import argparse +import json +import os +from datetime import datetime + +parser = argparse.ArgumentParser(description='Script to ingest licenses') +parser.add_argument('--source', help='Source (GitHub, PyPI, CRAN, Repology) or user') +parser.add_argument('projects', nargs='+', help='List of project names') +parser.add_argument('--manual', help='Manually provided license', required=False) +parser.add_argument('--spdx', help='SPDX identifier for the license', required=False) +args = parser.parse_args() + +# Retrieve license from various sources +def github(source): + repo = source.removeprefix('github:') + url = ( + "https://api.github.com/repos/{repo}/license".format(repo=repo) + ) + headers = { + "Accept": "application/vnd.github+json", + "Authorization": "Bearer {}".format(os.getenv('GITHUB_TOKEN')), + "X-GitHub-Api-Version": "2022-11-28", + } + r = requests.get(url, headers=headers) + if r.status_code != 200: + return "not found", None, None + data = r.json() + return data['license']['spdx_id'], 'GitHub', data['license']['url'] + +def pypi(project): + url = "https://pypi.org/pypi/{project}/json".format(project=project) + r = requests.get(url) + if r.status_code != 200: + return "not found", None, None + data = r.json() + return data['info']['license'], 'PyPI', data['info'].get('project_url') + +def cran(project): + url = "http://crandb.r-pkg.org/{project}".format(project=project) + r = requests.get(url) + if r.status_code != 200: + return "not found", None, None + data = r.json() + return data['License'], 'CRAN', None + +def repology(project): + url = "https://repology.org/api/v1/project/{project}".format( + project=project + ) + r = requests.get(url) + if r.status_code != 200: + return "not found", None, None + data = r.json() + return data.get('license', 'not found'), 'Repology', None + +def ecosysteDotms_pypi(project): + url = "https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/{project}".format( + project=project + ) + r = requests.get(url) + if r.status_code != 200: + return "not found", None, None + data = r.json() + return data.get('license', 'not found'), 'Ecosyste.ms (PyPI)', None + +def ecosysteDotms_github(source): + repo = source.removeprefix('github:') + url = "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/{repo}".format( + repo=repo + ) + r = requests.get(url) + if r.status_code != 200: + return "not found", None, None + data = r.json() + return data.get('license', 'not found'), 'Ecosyste.ms (GitHub)', None + +# Main license retrieval function +def license_info(project): + if args.source == 'pypi': + lic, source, url = ecosysteDotms_pypi(project) + elif "github" in args.source: + lic, source, url = ecosysteDotms_github(args.source) + elif args.manual: + lic = args.manual + source = args.source + url = None + else: + lic, source, url = "not found", None, None + + spdx_id = args.spdx if args.spdx else (lic if lic and lic != "not found" else None) + + info = { + "license": lic, + "source": source, + "spdx_id": spdx_id, + "retrieved_at": datetime.now().isoformat(), + } + return info + + +def update_json(licenses, project, info): + if project in licenses: + if 'history' not in licenses[project]: + licenses[project]['history'] = [] + licenses[project]['history'].append(info) + licenses[project]['current'] = info + print('Updated license for project {project}'.format(project=project)) + else: + licenses[project] = { + "current": info, + "history": [info], + } + print('Added new license for project {project}'.format(project=project)) + + lic_json = json.dumps(licenses, indent=4) + with open('licenses.json', 'w') as lic_file: + lic_file.write(lic_json) + + return licenses + +# Create patch output +def generate_patch(licenses): + patch = json.dumps(licenses, indent=4) + return patch + +# Function to save patch to a file +def save_patch(patch_content, filename="license_update.patch"): + with open(filename, 'w') as patch_file: + patch_file.write(patch_content) + print("Patch saved to {filename}".format(filename=filename)) + +def main(): + if os.path.exists('licenses.json'): + with open('licenses.json', 'r') as lic_dict: + licenses = json.loads(lic_dict.read()) + else: + licenses = {} + + for project in args.projects: + info = license_info(project) + update_json(licenses, project, info) + + patch = generate_patch(licenses) + save_patch(patch) + + with open('licenses.json', 'w') as lic_file: + lic_file.write(patch) + + print("Patch output:\n{patch}".format(patch=patch)) + +if __name__ == "__main__": + main() + From e517a4ebfa1f03102a80a4f1268b31ed074dd6c1 Mon Sep 17 00:00:00 2001 From: Nadia Martins Date: Mon, 9 Dec 2024 20:31:00 +0000 Subject: [PATCH 02/10] fix commits, branches, identation. Add content and ids --- licenses/check_licenses.yml | 32 +++++++++++++++++--------------- 1 file changed, 17 insertions(+), 15 deletions(-) diff --git a/licenses/check_licenses.yml b/licenses/check_licenses.yml index e6bb655816..17fd9c982e 100644 --- a/licenses/check_licenses.yml +++ b/licenses/check_licenses.yml @@ -2,26 +2,27 @@ name: Check and update licenses on: push: - branches: - - main + branches: [ "*-software.eessi.io" ] pull_request: - branches: - - main + branches: [ "*-software.eessi.io" ] +permissions: + contents: write # set permissions for writing jobs: license_update: runs-on: ubuntu-latest steps: - - name: Checkout repository - uses: actions/checkout@v3 + - name: Checkout out software-layer repository + uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 - name: Set up Python - uses: actions/setup-python@v4 + uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c with: - python-version: '3.X' + python-version: '3.9' - name: Run license script and generate patch + id: check_licenses env: GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} run: | @@ -33,17 +34,18 @@ jobs: fi - name: Create a PR (if changes detected) - uses: peter-evans/create-pull-request@v5 + id: create_pull_request + uses: peter-evans/create-pull-request@5e914681df9dc83aa4e4905692ca88beb2f9e91f # v7.0.5 if: steps.check_licenses.outputs.patch != '' with: - commit-message: "Auto PR: Update licenses" - title: "Auto PR: Update licenses" - body: ${{ steps.check_licenses.outputs.patch }} - branch: main #fork branch - base: main #specify right brancg here + commit-message: "Auto PR: Update licenses" + title: "Auto PR: Update licenses" + body: ${{ steps.check_licenses.outputs.patch }} + branch: update-licenses-${{ github.run_number }} + base: [ "*-software.eessi.io" ] - name: Apply patch (if no PR created) - if: steps.create_pull_request.outputs.pull-request-number == '' && steps.check_licenses.outputs.patch != '' + if: steps.create_pull_request.outputs.number == '' && steps.check_licenses.outputs.patch != '' run: | if [ -f license_update.patch ] && [ -s license_update.patch ]; then git apply license_update.patch From 1480ae1e7410d166bd8fc8861ede48796dd61694 Mon Sep 17 00:00:00 2001 From: Nadia Martins Date: Mon, 3 Feb 2025 10:39:41 +0000 Subject: [PATCH 03/10] adding licenses yml --- .github/workflows/check_licenses.yml | 59 ++++++++++++++++++++++++++++ 1 file changed, 59 insertions(+) create mode 100644 .github/workflows/check_licenses.yml diff --git a/.github/workflows/check_licenses.yml b/.github/workflows/check_licenses.yml new file mode 100644 index 0000000000..17fd9c982e --- /dev/null +++ b/.github/workflows/check_licenses.yml @@ -0,0 +1,59 @@ +name: Check and update licenses + +on: + push: + branches: [ "*-software.eessi.io" ] + pull_request: + branches: [ "*-software.eessi.io" ] +permissions: + contents: write # set permissions for writing + +jobs: + license_update: + runs-on: ubuntu-latest + + steps: + - name: Checkout out software-layer repository + uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 + + - name: Set up Python + uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c + with: + python-version: '3.9' + + - name: Run license script and generate patch + id: check_licenses + env: + GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} + run: | + python update_licenses.py --source=pypi TensorFlow + python update_licenses.py --source=github:easybuilders/easybuild EasyBuild + if [ -f license_update.patch ] && [ -s license_update.patch ]; then + PATCH_CONTENT=$(cat license_update.patch) + echo "patch=$PATCH_CONTENT" >> $GITHUB_OUTPUT + fi + + - name: Create a PR (if changes detected) + id: create_pull_request + uses: peter-evans/create-pull-request@5e914681df9dc83aa4e4905692ca88beb2f9e91f # v7.0.5 + if: steps.check_licenses.outputs.patch != '' + with: + commit-message: "Auto PR: Update licenses" + title: "Auto PR: Update licenses" + body: ${{ steps.check_licenses.outputs.patch }} + branch: update-licenses-${{ github.run_number }} + base: [ "*-software.eessi.io" ] + + - name: Apply patch (if no PR created) + if: steps.create_pull_request.outputs.number == '' && steps.check_licenses.outputs.patch != '' + run: | + if [ -f license_update.patch ] && [ -s license_update.patch ]; then + git apply license_update.patch + else + echo "No changes to apply" + fi + git add licenses.json + git diff --cached --exit-code || git commit -m "Update licenses.json" + git push + env: + GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} From bbb8ee9c35706b60439ed7597c9869ff02c4f4ec Mon Sep 17 00:00:00 2001 From: torri Date: Thu, 27 Feb 2025 17:28:25 +0100 Subject: [PATCH 04/10] needs more refinement but to show the progress for now --- licenses/licenses.json | 2755 ++++++++++++++++++++++++++++++++++- licenses/update_licenses.py | 173 ++- 2 files changed, 2848 insertions(+), 80 deletions(-) diff --git a/licenses/licenses.json b/licenses/licenses.json index 8831ed368c..fc75a368c8 100644 --- a/licenses/licenses.json +++ b/licenses/licenses.json @@ -1,10 +1,2753 @@ { - "EasyBuild": { - "spdx": "GPL-2.0-only", - "license_url": "https://easybuild.io" + "ALL/0.9.2-foss-2023a": { + "License": "not found", + "Needs Manual Check": true, + "Retrieved At": "2025-02-27T15:53:29.100793" }, - "GCCcore": { - "spdx": "GPL-2.0-with-GCC-exception", - "license_url": "https://github.com/gcc-mirror/gcc/blob/master/COPYING" + "AOFlagger/3.4.0-foss-2023b": { + "License": "not found", + "Needs Manual Check": true, + "Retrieved At": "2025-02-27T15:53:29.447234" + }, + "ASE/3.22.1-gfbf-2022b": { + "License": "not found", + "Needs Manual Check": true, + "Retrieved At": "2025-02-27T15:53:29.842785" + }, + "ATK/2.38.0-GCCcore-13.2.0": { + "License": [ + "Other" + ], + "Needs Manual Check": false, + "Retrieved At": "2025-02-27T15:53:30.189547" + }, + "Abseil/20240116.1-GCCcore-13.2.0": { + "License": [ + "Apache-2.0" + ], + "Needs Manual Check": false, + "Retrieved At": "2025-02-27T15:53:30.611517" + }, + "Archive-Zip/1.68-GCCcore-12.2.0": { + "License": [ + "Other" + ], + "Needs Manual Check": false, + "Retrieved At": "2025-02-27T15:53:30.991588" + }, + "Armadillo/12.8.0-foss-2023b": { + "License": [ + "Apache-2.0" + ], + "Needs Manual Check": false, + "Retrieved At": "2025-02-27T15:53:31.434616" + }, + "Arrow/16.1.0-gfbf-2023b": { + "License": [ + "Other" + ], + "Needs Manual Check": false, + "Retrieved At": "2025-02-27T15:53:31.774589" + }, + "BCFtools/1.18-GCC-12.3.0": { + "License": "not found", + "Needs Manual Check": true, + "Retrieved At": "2025-02-27T15:53:32.554180" + }, + "BLAST+/2.14.1-gompi-2023a": { + "License": [ + "Other" + ], + "Needs Manual Check": false, + "Retrieved At": "2025-02-27T15:53:32.985170" + }, + "BLIS/0.9.0-GCC-13.2.0": { + "License": "other", + "Needs Manual Check": true, + "Retrieved At": "2025-02-27T15:53:33.189893" + }, + "BWA/0.7.18-GCCcore-12.3.0": { + "License": "not found", + "Needs Manual Check": true, + "Retrieved At": "2025-02-27T15:53:34.013710" + }, + "BamTools/2.5.2-GCC-12.2.0": { + "License": "mit", + "Needs Manual Check": false, + "Retrieved At": "2025-02-27T15:53:34.304312" + }, + "Bazel/6.3.1-GCCcore-12.3.0": { + "License": "not found", + "Needs Manual Check": true, + "Retrieved At": "2025-02-27T15:53:35.060698" + }, + "BeautifulSoup/4.12.2-GCCcore-12.3.0": { + "License": [ + "Other" + ], + "Needs Manual Check": false, + "Retrieved At": "2025-02-27T15:53:35.441440" + }, + "Bio-DB-HTS/3.01-GCC-12.2.0": { + "License": "not found", + "Needs Manual Check": true, + "Retrieved At": "2025-02-27T15:53:36.211170" + }, + "Bio-SearchIO-hmmer/1.7.3-GCC-12.2.0": { + "License": "not found", + "Needs Manual Check": true, + "Retrieved At": "2025-02-27T15:53:36.983623" + }, + "BioPerl/1.7.8-GCCcore-12.3.0": { + "License": "not found", + "Needs Manual Check": true, + "Retrieved At": "2025-02-27T15:53:37.343507" + }, + "Biopython/1.83-foss-2023a": { + "License": "not found", + "Needs Manual Check": true, + "Retrieved At": "2025-02-27T15:53:38.183475" + }, + "Bison/3.8.2-GCCcore-13.2.0": { + "License": "not found", + "Needs Manual Check": true, + "Retrieved At": "2025-02-27T15:53:38.582722" + }, + "Boost/1.83.0-GCC-13.2.0": { + "License": [ + "Other" + ], + "Needs Manual Check": false, + "Retrieved At": "2025-02-27T15:53:38.994591" + }, + "Boost.MPI/1.83.0-gompi-2023b": { + "License": [ + "Other" + ], + "Needs Manual Check": false, + "Retrieved At": "2025-02-27T15:53:39.440954" + }, + "Boost.Python/1.83.0-GCC-13.2.0": { + "License": "not found", + "Needs Manual Check": true, + "Retrieved At": "2025-02-27T15:53:40.239097" + }, + "Bowtie2/2.5.1-GCC-12.2.0": { + "License": [ + "Other" + ], + "Needs Manual Check": false, + "Retrieved At": "2025-02-27T15:53:40.581819" + }, + "Brotli/1.1.0-GCCcore-13.2.0": { + "License": "mit", + "Needs Manual Check": false, + "Retrieved At": "2025-02-27T15:53:40.839397" + }, + "Brunsli/0.1-GCCcore-13.2.0": { + "License": "mit", + "Needs Manual Check": false, + "Retrieved At": "2025-02-27T15:53:41.032503" + }, + "CD-HIT/4.8.1-GCC-12.2.0": { + "License": "not found", + "Needs Manual Check": true, + "Retrieved At": "2025-02-27T15:53:41.744270" + }, + "CDO/2.2.2-gompi-2023b": { + "License": "not found", + "Needs Manual Check": true, + "Retrieved At": "2025-02-27T15:53:42.636421" + }, + "CFITSIO/4.3.1-GCCcore-13.2.0": { + "License": [ + "Other" + ], + "Needs Manual Check": false, + "Retrieved At": "2025-02-27T15:53:43.021945" + }, + "CGAL/5.6-GCCcore-12.3.0": { + "License": [ + "CNRI-Python-GPL-Compatible" + ], + "Needs Manual Check": false, + "Retrieved At": "2025-02-27T15:53:43.414010" + }, + "CMake/3.27.6-GCCcore-13.2.0": { + "License": [ + "BSD-3-Clause" + ], + "Needs Manual Check": false, + "Retrieved At": "2025-02-27T15:53:43.837945" + }, + "CP2K/2023.1-foss-2023a": { + "License": "not found", + "Needs Manual Check": true, + "Retrieved At": "2025-02-27T15:53:44.611834" + }, + "CUDA/12.1.1": { + "License": [ + "Other" + ], + "Needs Manual Check": false, + "Retrieved At": "2025-02-27T15:53:45.025057" + }, + "CUDA-Samples/12.1-GCC-12.3.0-CUDA-12.1.1": { + "License": "other", + "Needs Manual Check": true, + "Retrieved At": "2025-02-27T15:53:45.342249" + }, + "CapnProto/1.0.1-GCCcore-12.3.0": { + "License": [ + "Other" + ], + "Needs Manual Check": false, + "Retrieved At": "2025-02-27T15:53:45.698246" + }, + "Cartopy/0.22.0-foss-2023a": { + "License": [ + "Other" + ], + "Needs Manual Check": false, + "Retrieved At": "2025-02-27T15:53:46.176136" + }, + "Cassiopeia/2.0.0-foss-2023a": { + "License": "mit", + "Needs Manual Check": false, + "Retrieved At": "2025-02-27T15:53:46.415924" + }, + "Catch2/2.13.9-GCCcore-13.2.0": { + "License": "bsl-1.0", + "Needs Manual Check": false, + "Retrieved At": "2025-02-27T15:53:46.881221" + }, + "Cbc/2.10.11-foss-2023a": { + "License": "other", + "Needs Manual Check": true, + "Retrieved At": "2025-02-27T15:53:47.158707" + }, + "Cgl/0.60.8-foss-2023a": { + "License": "other", + "Needs Manual Check": true, + "Retrieved At": "2025-02-27T15:53:47.392925" + }, + "Clp/1.17.9-foss-2023a": { + "License": "other", + "Needs Manual Check": true, + "Retrieved At": "2025-02-27T15:53:47.679247" + }, + "CoinUtils/2.11.10-GCC-12.3.0": { + "License": "other", + "Needs Manual Check": true, + "Retrieved At": "2025-02-27T15:53:47.927356" + }, + "Core/settarg/": { + "License": "not found", + "Needs Manual Check": true, + "Retrieved At": "2025-02-27T15:53:47.927415" + }, + "Critic2/1.2-foss-2023a": { + "License": "not found", + "Needs Manual Check": true, + "Retrieved At": "2025-02-27T15:53:48.818545" + }, + "CubeLib/4.8.2-GCCcore-13.2.0": { + "License": [ + "Other" + ], + "Needs Manual Check": false, + "Retrieved At": "2025-02-27T15:53:49.290582" + }, + "CubeWriter/4.8.2-GCCcore-13.2.0": { + "License": [ + "Other" + ], + "Needs Manual Check": false, + "Retrieved At": "2025-02-27T15:53:50.615549" + }, + "Cython/3.0.10-GCCcore-13.2.0": { + "License": [ + "Apache-2.0" + ], + "Needs Manual 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"2025-02-27T16:14:44.821202" + }, + "yelp-xsl/42.1-GCCcore-12.3.0": { + "License": "not found", + "Needs Manual Check": true, + "Retrieved At": "2025-02-27T16:14:46.276365" + }, + "zstd/1.5.5-GCCcore-13.2.0": { + "License": "not found", + "Needs Manual Check": true, + "Retrieved At": "2025-02-27T16:14:46.724092" } } diff --git a/licenses/update_licenses.py b/licenses/update_licenses.py index d4b898e24c..c465e42d9d 100644 --- a/licenses/update_licenses.py +++ b/licenses/update_licenses.py @@ -2,98 +2,105 @@ import argparse import json import os +import re from datetime import datetime -parser = argparse.ArgumentParser(description='Script to ingest licenses') -parser.add_argument('--source', help='Source (GitHub, PyPI, CRAN, Repology) or user') -parser.add_argument('projects', nargs='+', help='List of project names') -parser.add_argument('--manual', help='Manually provided license', required=False) -parser.add_argument('--spdx', help='SPDX identifier for the license', required=False) -args = parser.parse_args() - -# Retrieve license from various sources -def github(source): - repo = source.removeprefix('github:') - url = ( - "https://api.github.com/repos/{repo}/license".format(repo=repo) - ) - headers = { - "Accept": "application/vnd.github+json", - "Authorization": "Bearer {}".format(os.getenv('GITHUB_TOKEN')), - "X-GitHub-Api-Version": "2022-11-28", - } - r = requests.get(url, headers=headers) - if r.status_code != 200: - return "not found", None, None - data = r.json() - return data['license']['spdx_id'], 'GitHub', data['license']['url'] - -def pypi(project): - url = "https://pypi.org/pypi/{project}/json".format(project=project) - r = requests.get(url) - if r.status_code != 200: - return "not found", None, None - data = r.json() - return data['info']['license'], 'PyPI', data['info'].get('project_url') - -def cran(project): - url = "http://crandb.r-pkg.org/{project}".format(project=project) - r = requests.get(url) - if r.status_code != 200: - return "not found", None, None - data = r.json() - return data['License'], 'CRAN', None +url_repo = "https://repos.ecosyste.ms/api/v1/hosts" +url_reg = "https://packages.ecosyste.ms/api/v1/registries" -def repology(project): - url = "https://repology.org/api/v1/project/{project}".format( - project=project - ) +def ecosystems_list(url): r = requests.get(url) if r.status_code != 200: return "not found", None, None data = r.json() - return data.get('license', 'not found'), 'Repology', None - -def ecosysteDotms_pypi(project): - url = "https://packages.ecosyste.ms/api/v1/registries/pypi.org/packages/{project}".format( - project=project + listing = [] + for reg in data: + listing.append(reg["name"]) + return(listing) + +def validate_repo_format(value): + # Validates the input format :/ and ensures the hostname is allowed. + pattern = r'^([^:]+):(?:(\w+)/)?([^/]+)/(.+)$' + match = re.match(pattern, value) + + if not match: + raise argparse.ArgumentTypeError( + f"Invalid format. Use :/ or or ://.") + + hostname, group, user, repo = match.groups() + + if hostname not in ecosystems_list(url_repo): + raise argparse.ArgumentTypeError( + f"Invalid hostname '{hostname}'. Check '--repo help'" + ) + + return value # Return the validated string + +def parse_arguments(): + + # Positional arguments + parser = argparse.ArgumentParser(description='Script to ingest licenses') + parser.add_argument('project', nargs='+', help='List of project name') + parser.add_argument( + '--manual', help='Manually provided license', required=False) + parser.add_argument( + '--spdx', help='SPDX identifier for the license', required=False) + + # Now the complicated ones + group = parser.add_mutually_exclusive_group() + group.add_argument('--registry', help='Origin registry. Use "--registry help" to see all available options', metavar='REGISTRY', choices=ecosystems_list(url_reg)) + group.add_argument('--repo', help='Origin repository. Format: :/. All available hosts shown with "--repo help"', metavar='REPOSITORY', type=validate_repo_format) + + args = parser.parse_args() + return args + +# Retrieve license from ecosyste.ms package API +def ecosystems_packages(registry, package): + print("available registries: ") + ecosystems_registries() + url = "https://packages.ecosyste.ms/api/v1/registries/{registry}/packages/{package}".format( + registry=registry, package=package ) + print(url) r = requests.get(url) if r.status_code != 200: return "not found", None, None data = r.json() - return data.get('license', 'not found'), 'Ecosyste.ms (PyPI)', None - -def ecosysteDotms_github(source): - repo = source.removeprefix('github:') - url = "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/{repo}".format( - repo=repo - ) + print(data.get('licenses')) + return data.get('normalized_licenses', 'not found'), registry + +# Retrieve license from ecosyste.ms repo API +def ecosystems_repo(repository, source): +# hostname, user, repo = re.match(r'^([^:]+):([^/]+)/(.+)$', repository).groups() + hostname, group, user, repo = re.match(r'^([^:]+):(?:(\w+)/)?([^/]+)/(.+)$', repository).groups() + + if group: + url = "https://repos.ecosyste.ms/api/v1/hosts/{hostname}/repositories/{group}%2F{user}%2F{repo}".format( + hostname=hostname, group=group, user=user, repo=repo) + else: + url = "https://repos.ecosyste.ms/api/v1/hosts/{hostname}/repositories/{user}%2F{repo}".format( + hostname=hostname, user=user, repo=repo) + print(url) r = requests.get(url) if r.status_code != 200: return "not found", None, None data = r.json() - return data.get('license', 'not found'), 'Ecosyste.ms (GitHub)', None + return data.get('license', 'not found') # Main license retrieval function -def license_info(project): - if args.source == 'pypi': - lic, source, url = ecosysteDotms_pypi(project) - elif "github" in args.source: - lic, source, url = ecosysteDotms_github(args.source) - elif args.manual: - lic = args.manual - source = args.source - url = None +def go_fetch(args): + if args.registry: + lic, source = ecosystems_packages(args.registry, args.project) + elif args.repo: + lic = ecosystems_repo(args.repo, args.project) else: lic, source, url = "not found", None, None - - spdx_id = args.spdx if args.spdx else (lic if lic and lic != "not found" else None) + spdx_id = args.spdx if args.spdx else ( + lic if lic and lic != "not found" else None) info = { "license": lic, - "source": source, - "spdx_id": spdx_id, +# "source": source, "retrieved_at": datetime.now().isoformat(), } return info @@ -111,7 +118,8 @@ def update_json(licenses, project, info): "current": info, "history": [info], } - print('Added new license for project {project}'.format(project=project)) + print('Added new license for project {project}'.format( + project=project)) lic_json = json.dumps(licenses, indent=4) with open('licenses.json', 'w') as lic_file: @@ -120,26 +128,43 @@ def update_json(licenses, project, info): return licenses # Create patch output + + def generate_patch(licenses): patch = json.dumps(licenses, indent=4) return patch # Function to save patch to a file + + def save_patch(patch_content, filename="license_update.patch"): with open(filename, 'w') as patch_file: patch_file.write(patch_content) print("Patch saved to {filename}".format(filename=filename)) + def main(): + args = parse_arguments() + if os.path.exists('licenses.json'): with open('licenses.json', 'r') as lic_dict: licenses = json.loads(lic_dict.read()) else: licenses = {} - for project in args.projects: - info = license_info(project) - update_json(licenses, project, info) + for project in args.project: + # add if not manual, this just for fetching the license! + if not args.manual: + # we fetchin' + info = go_fetch(args) + update_json(licenses, project, info) + else: + # we inserting it manually + info = { + "license": args.spdx, + "retrieved_at": datetime.now().isoformat(), + } + patch = generate_patch(licenses) save_patch(patch) @@ -149,6 +174,6 @@ def main(): print("Patch output:\n{patch}".format(patch=patch)) + if __name__ == "__main__": main() - From 3355eb2e7ec8beebcd3efd64fe0cb051aad13a44 Mon Sep 17 00:00:00 2001 From: torri Date: Fri, 28 Feb 2025 15:48:57 +0100 Subject: [PATCH 05/10] updated a bit --- licenses/licenses.json | 1314 ++++++++++++++++++++-------------------- 1 file changed, 656 insertions(+), 658 deletions(-) diff --git a/licenses/licenses.json b/licenses/licenses.json index fc75a368c8..d978520474 100644 --- a/licenses/licenses.json +++ b/licenses/licenses.json @@ -2,481 +2,481 @@ "ALL/0.9.2-foss-2023a": { "License": "not found", "Needs Manual Check": true, - "Retrieved At": "2025-02-27T15:53:29.100793" + "Retrieved From": "not found" }, "AOFlagger/3.4.0-foss-2023b": { "License": "not found", "Needs Manual Check": true, - "Retrieved At": "2025-02-27T15:53:29.447234" + "Retrieved From": "not found" }, "ASE/3.22.1-gfbf-2022b": { "License": "not found", "Needs Manual Check": true, - "Retrieved At": "2025-02-27T15:53:29.842785" + "Retrieved From": "not found" }, "ATK/2.38.0-GCCcore-13.2.0": { "License": [ "Other" ], "Needs Manual Check": false, - "Retrieved At": "2025-02-27T15:53:30.189547" + "Retrieved From": "https://developer.gnome.org/atk/" }, "Abseil/20240116.1-GCCcore-13.2.0": { "License": [ "Apache-2.0" ], "Needs Manual Check": false, - "Retrieved At": "2025-02-27T15:53:30.611517" + "Retrieved From": "https://abseil.io/" }, "Archive-Zip/1.68-GCCcore-12.2.0": { "License": [ "Other" ], "Needs Manual Check": false, - "Retrieved At": "2025-02-27T15:53:30.991588" + "Retrieved From": "https://metacpan.org/pod/Archive::Zip" }, "Armadillo/12.8.0-foss-2023b": { "License": [ "Apache-2.0" ], "Needs Manual Check": false, - "Retrieved At": "2025-02-27T15:53:31.434616" + "Retrieved From": "https://arma.sourceforge.net/" }, "Arrow/16.1.0-gfbf-2023b": { "License": [ "Other" ], "Needs Manual Check": false, - "Retrieved At": "2025-02-27T15:53:31.774589" + "Retrieved From": "https://arrow.apache.org" }, "BCFtools/1.18-GCC-12.3.0": { "License": "not found", "Needs Manual Check": true, - "Retrieved At": "2025-02-27T15:53:32.554180" + "Retrieved From": "not found" }, "BLAST+/2.14.1-gompi-2023a": { "License": [ "Other" ], "Needs Manual Check": false, - "Retrieved At": "2025-02-27T15:53:32.985170" + "Retrieved From": "https://blast.ncbi.nlm.nih.gov/" }, "BLIS/0.9.0-GCC-13.2.0": { - "License": "other", + "License": "not found", "Needs Manual Check": true, - "Retrieved At": "2025-02-27T15:53:33.189893" + "Retrieved From": "not found" }, "BWA/0.7.18-GCCcore-12.3.0": { "License": "not found", "Needs Manual Check": true, - "Retrieved At": "2025-02-27T15:53:34.013710" + "Retrieved From": "not found" }, "BamTools/2.5.2-GCC-12.2.0": { - "License": "mit", - "Needs Manual Check": false, - "Retrieved At": "2025-02-27T15:53:34.304312" + "License": "not found", + "Needs Manual Check": true, + "Retrieved From": "not found" }, "Bazel/6.3.1-GCCcore-12.3.0": { "License": "not found", "Needs Manual Check": true, - "Retrieved At": "2025-02-27T15:53:35.060698" + "Retrieved From": "not found" }, "BeautifulSoup/4.12.2-GCCcore-12.3.0": { "License": [ "Other" ], "Needs Manual Check": false, - "Retrieved At": "2025-02-27T15:53:35.441440" + "Retrieved From": "https://www.crummy.com/software/BeautifulSoup" }, "Bio-DB-HTS/3.01-GCC-12.2.0": { "License": "not found", "Needs Manual Check": true, - 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"Source url": "https://ffmpeg.org/releases/" + "License": "GPL-3.0", + "Permission to redistribute": true, + "Retrieved from": "https://www.ffmpeg.org/legal.html" }, "FLAC/1.4.3-GCCcore-13.2.0": { - "License": [ - "CNRI-Python-GPL-Compatible" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fxiph.org%2Fflac%2F" + "License": "BSD-3-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://xiph.org/flac/" }, "FLTK/1.3.8-GCCcore-12.3.0": { - "License": "https://www.fltk.org/COPYING.php", - "Needs Manual Check": false, - "Retrieved from": "https://www.fltk.org" + "License": "GPL-3.0", + "Permission to redistribute": true, + "Retrieved from": "https://www.fltk.org/COPYING.php" }, "FastME/2.1.6.3-GCC-12.3.0": { - "License": [ - "Other" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=http%3A%2F%2Fwww.atgc-montpellier.fr%2Ffastme%2F" + "License": "gpl-2.0", + "Permission to redistribute": true, + "Retrieved from": "http://www.atgc-montpellier.fr/fastme/" }, "Fiona/1.9.5-foss-2023a": { "License": "bsd-3-clause", - "Needs Manual Check": false, - "Retrieved from": "https://repos.ecosyste.ms/api/v1/repositories/lookup?url=https%3A%2F%2Fgithub.com%2FToblerity%2FFiona" + "Permission to redistribute": true, + "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Toblerity%2FFiona" }, "Flask/2.2.3-GCCcore-12.2.0": { - "License": "not found", - "Needs Manual Check": true, - "Homepage": "https://www.palletsprojects.com/p/flask/", - "Source url": "N/A" + "License": "bsd-3-clause", + "Permission to redistribute": true, + "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pallets%2Fflask" }, +# https://spdx.org/licenses/BSD-3-Clause-Open-MPI.html "FlexiBLAS/3.3.1-GCC-13.2.0": { "License": "bsd-3-clause-open-mpi", - "Needs Manual Check": false, - "Retrieved from": "https://repos.ecosyste.ms/api/v1/repositories/lookup?url=https%3A%2F%2Fgitlab.mpi-magdeburg.mpg.de%2Fsoftware%2Fflexiblas-release" + "Permission to redistribute": true, + "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/gitlab.mpi-magdeburg.mpg.de/repositories/software%2Fflexiblas-release" }, "FragGeneScan/1.31-GCCcore-12.3.0": { - "License": "not found", - "Needs Manual Check": true, - "Homepage": "https://omics.informatics.indiana.edu/FragGeneScan/", - "Source url": "N/A" + "License": "gpl-3.0", + "Permission to redistribute": true, + "Retrieved from": "https://raw.githubusercontent.com/gaberoo/FragGeneScan/master/LICENSE" }, "FreeImage/3.18.0-GCCcore-12.3.0": { - "License": "http://freeimage.sourceforge.net/license.html", - "Needs Manual Check": false, - "Retrieved from": "http://freeimage.sourceforge.net" + "License": "GPL-3.0", + "Permission to redistribute": true, + "Retrieved from": "http://freeimage.sourceforge.net/license.html" }, "FriBidi/1.0.13-GCCcore-13.2.0": { "License": "lgpl-2.1", - "Needs Manual Check": false, - "Retrieved from": "https://repos.ecosyste.ms/api/v1/repositories/lookup?url=https%3A%2F%2Fgithub.com%2Ffribidi%2Ffribidi" + "Permission to redistribute": true, + "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/fribidi%2Ffribidi" }, "GATK/4.5.0.0-GCCcore-12.3.0-Java-17": { - "License": "not found", - "Needs Manual Check": true, - "Homepage": "https://www.broadinstitute.org/gatk/", - "Source url": "https://github.com/broadinstitute/gatk/releases/download/4.5.0.0/" + "License": "apache-2.0", + "Permission to redistribute": true, + "Retrieved from": "https://raw.githubusercontent.com/broadinstitute/gatk/refs/heads/master/LICENSE.TXT" }, "GCC/13.2.0": { - "License": [ - "GPL-3.0-or-later" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fgcc.gnu.org%2F" + "License": "GPL-3.0-or-later", + "Permission to redistribute": true, + "Retrieved from": "https://gcc.gnu.org/" }, "GCCcore/13.2.0": { - "License": [ - "GPL-3.0-or-later" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fgcc.gnu.org%2F" + "License": "GPL-3.0-or-later", + "Permission to redistribute": true, + "Retrieved from": "https://gcc.gnu.org/" }, "GDAL/3.9.0-foss-2023b": { - "License": "https://www.gdal.org/license.html", - "Needs Manual Check": false, - "Retrieved from": "https://www.gdal.org" + "License": "MIT", + "Permission to redistribute": true, + "Retrieved from": "https://www.gdal.org/license.html" }, "GDB/13.2-GCCcore-12.3.0": { - "License": "not found", - "Needs Manual Check": true, - "Homepage": "https://www.gnu.org/software/gdb/gdb.html", - "Source url": "N/A" + "License": "gpl-3.0", + "Permission to redistribute": true, + "Retrieved from": "https://www.gnu.org/software/gdb" }, "GDRCopy/2.4-GCCcore-13.2.0": { "License": "mit", - "Needs Manual Check": false, - "Retrieved from": "https://repos.ecosyste.ms/api/v1/repositories/lookup?url=https%3A%2F%2Fgithub.com%2FNVIDIA%2Fgdrcopy" + "Permission to redistribute": true, + "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/NVIDIA%2Fgdrcopy" }, "GEOS/3.12.1-GCC-13.2.0": { - "License": "http://www.gnu.org/licenses/old-licenses/lgpl-2.1.html", - "Needs Manual Check": false, - "Retrieved from": "https://trac.osgeo.org/geos" + "License": "GPL-3.0", + "Permission to redistribute": true, + "Retrieved from": "http://www.gnu.org/licenses/old-licenses/lgpl-2.1.html" }, "GL2PS/1.4.2-GCCcore-12.3.0": { - "License": [ - "Other" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fwww.geuz.org%2Fgl2ps%2F" + "License": "gpl-1.0", + "Permission to redistribute": true, + "Retrieved from": "https://www.geuz.org/gl2ps/" }, "GLPK/5.0-GCCcore-13.2.0": { - "License": [ - "GPL-3.0-only" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fwww.gnu.org%2Fsoftware%2Fglpk%2F" + "License": "GPL-3.0-only", + "Permission to redistribute": true, + "Retrieved from": "https://www.gnu.org/software/glpk/" }, "GLib/2.78.1-GCCcore-13.2.0": { - "License": [ - "LGPL-2.1-or-later" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fwww.gtk.org%2F" + "License": "LGPL-2.1-or-later", + "Permission to redistribute": true, + "Retrieved from": "https://www.gtk.org/" }, "GMP/6.3.0-GCCcore-13.2.0": { - "License": [ - "LGPL-3.0-or-later", - "GPL-2.0-or-later" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fgmplib.org%2F" + "License": "LGPL-3.0-or-later, GPL-2.0-or-later", + "Permission to redistribute": true, + "Retrieved from": "https://gmplib.org/" }, "GObject-Introspection/1.78.1-GCCcore-13.2.0": { - "License": "not found", - "Needs Manual Check": true, - "Homepage": "https://gi.readthedocs.io/en/latest/", - "Source url": "N/A" + "License": "mit", + "Permission to redistribute": true, + "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/readthedocs%2Fsphinx_rtd_theme" }, "GROMACS/2024.4-foss-2023b": { - "License": [ - "Other" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fwww.gromacs.org" + "License": "LGPL-2.1", + "Permission to redistribute": true, + "Retrieved from": "https://www.gromacs.org" }, "GSL/2.7-GCC-13.2.0": { - "License": "https://www.gnu.org/licenses/licenses.html", - "Needs Manual Check": false, - "Retrieved from": "https://www.gnu.org/software/gsl/" + "License": "GPL-3.0", + "Permission to redistribute": true, + "Retrieved from": "https://www.gnu.org/licenses/licenses.html" }, "GST-plugins-base/1.24.8-GCC-13.2.0": { - "License": [ - "Other" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fgstreamer.freedesktop.org%2F" + "License": "lgpl-2.1", + "Permission to redistribute": true, + "Retrieved from": "https://gitlab.freedesktop.org/gstreamer/gst-plugins-base/-/raw/discontinued-for-monorepo/COPYING" }, "GStreamer/1.24.8-GCC-13.2.0": { - "License": [ - "Other" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fgstreamer.freedesktop.org%2F" + "License": "lgpl-2.1", + "Permission to redistribute": true, + "Retrieved from": "https://gitlab.freedesktop.org/gstreamer/gstreamer/-/raw/main/LICENSE" }, "GTK3/3.24.39-GCCcore-13.2.0": { - "License": "https://developer.gnome.org/gtk3/stable/enum.License.html", - "Needs Manual Check": false, - "Retrieved from": "https://developer.gnome.org/gtk3/stable/" + "License": "lgpl-2.1", + "Permission to redistribute": true, + "Retrieved from": "https://developer.gnome.org/gtk3/stable/enum.License.html" }, "Gdk-Pixbuf/2.42.10-GCCcore-13.2.0": { - "License": "not found", - "Needs Manual Check": true, - "Homepage": "https://docs.gtk.org/gdk-pixbuf/", - "Source url": "N/A" + "License": "lgpl-2.1", + "Permission to redistribute": true, + "Retrieved from": "https://gitlab.gnome.org/GNOME/gdk-pixbuf/-/raw/master/COPYING" }, "GenomeTools/1.6.2-GCC-12.2.0": { - "License": "http://genometools.org/license.html", - "Needs Manual Check": false, - "Retrieved from": "http://genometools.org" + "License": "isc", + "Permission to redistribute": true, + "Retrieved from": "http://genometools.org/license.html" }, "Ghostscript/10.02.1-GCCcore-13.2.0": { - "License": "https://www.gnu.org/licenses/agpl-3.0.html", - "Needs Manual Check": false, - "Retrieved from": "https://ghostscript.com" + "License": "GPL-3.0", + "Permission to redistribute": true, + "Retrieved from": "https://www.gnu.org/licenses/agpl-3.0.html" }, "GitPython/3.1.40-GCCcore-12.3.0": { - "License": [ - "Other" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fgitpython.readthedocs.org" + "License": "BSD-3-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/gitpython-developers/GitPython/blob/main/LICENSE" }, "Graphene/1.10.8-GCCcore-13.2.0": { - "License": "https://github.com/ebassi/graphene/blob/master/LICENSE", - "Needs Manual Check": false, - "Retrieved from": "https://ebassi.github.io/graphene/" + "License": "mit", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/ebassi/graphene?tab=License-1-ov-file#readme" }, "HDBSCAN/0.8.38.post1-foss-2023a": { - "License": "not found", - "Needs Manual Check": true, - "Homepage": "http://hdbscan.readthedocs.io/en/latest/", - "Source url": "N/A" + "License": "mit", + "Permission to redistribute": true, + "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/readthedocs%2Fsphinx_rtd_theme" }, "HDF/4.2.16-2-GCCcore-13.2.0": { - "License": "not found", - "Needs Manual Check": true, - "Homepage": "https://support.hdfgroup.org/products/hdf4/", - "Source url": "http://support.hdfgroup.org/ftp/HDF/releases/HDF4.2.16/src/" + "License": "BSD-3-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://www.hdfgroup.org/" }, "HDF5/1.14.3-gompi-2023b": { - "License": "not found", - "Needs Manual Check": true, - "Homepage": "https://portal.hdfgroup.org/display/support", - "Source url": "https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-1.14/hdf5-1.14.3/src" + "License": "BSD-3-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://www.hdfgroup.org/" }, "HMMER/3.4-gompi-2023a": { - "License": "not found", - "Needs Manual Check": true, - "Homepage": "http://hmmer.org/", - "Source url": "N/A" + "License": "BSD-3-Clause", + "Permission to redistribute": true, + "Retrieved from": "http://hmmer.org/license.html" }, "HPL/2.3-foss-2023b": { - "License": [ - "Other" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fwww.netlib.org%2Fbenchmark%2Fhpl%2F" + "License": "BSD-3-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://www.netlib.org/benchmark/hpl/" }, "HTSlib/1.19.1-GCC-13.2.0": { - "License": "not found", - "Needs Manual Check": true, - "Homepage": "https://www.htslib.org/", - "Source url": "https://github.com/samtools/htslib/releases/download/1.19.1/" + "License": "MIT", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/samtools/htslib" }, "HarfBuzz/8.2.2-GCCcore-13.2.0": { - "License": [ - "MIT" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fwww.freedesktop.org%2Fwiki%2FSoftware%2FHarfBuzz" + "License": "MIT", + "Permission to redistribute": true, + "Retrieved from": "https://www.freedesktop.org/wiki/Software/HarfBuzz" }, "HepMC3/3.2.6-GCC-12.3.0": { - "License": "not found", - "Needs Manual Check": true, - "Homepage": "http://hepmc.web.cern.ch/hepmc/", - "Source url": "https://hepmc.web.cern.ch/hepmc/releases/" + "License": "GPL-3.0-or-later", + "Permission to redistribute": true, + "Retrieved from": "https://gitlab.cern.ch/hepmc/HepMC3" }, "Highway/1.0.4-GCCcore-12.3.0": { "License": "apache-2.0", - "Needs Manual Check": false, - "Retrieved from": "https://repos.ecosyste.ms/api/v1/repositories/lookup?url=https%3A%2F%2Fgithub.com%2Fgoogle%2Fhighway" + "Permission to redistribute": true, + "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/google%2Fhighway" }, "Hypre/2.29.0-foss-2023a": { - "License": "https://github.com/hypre-space/hypre/blob/master/LICENSE-APACHE", - "Needs Manual Check": false, - "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hypre-space%2Fhypre" + "License": "Apache-2.0", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/hypre-space/hypre" }, "ICU/74.1-GCCcore-13.2.0": { - "License": [ - "ICU" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Ficu.unicode.org" + "License": "ICU", + "Permission to redistribute": true, + "Retrieved from": "https://icu.unicode.org" }, "IDG/1.2.0-foss-2023b": { - "License": "not found", - "Needs Manual Check": true, - "Homepage": "https://idg.readthedocs.io/", - "Source url": "N/A" + "License": "mit", + "Permission to redistribute": true, + "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/readthedocs%2Fsphinx_rtd_theme" }, "IPython/8.17.2-GCCcore-13.2.0": { - "License": "not found", - "Needs Manual Check": true, - "Homepage": "https://ipython.org/index.html", - "Source url": "N/A" + "License": "BSD-3-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/ipython/ipython/blob/main/LICENSE" }, "IQ-TREE/2.3.5-gompi-2023a": { "License": "gpl-2.0", - "Needs Manual Check": false, - "Retrieved from": "https://repos.ecosyste.ms/api/v1/repositories/lookup?url=https%3A%2F%2Fgithub.com%2Fiqtree%2Fiqtree2" + "Permission to redistribute": true, + "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/iqtree%2Fiqtree2" }, "ISA-L/2.30.0-GCCcore-12.3.0": { - "License": "https://github.com/intel/isa-l/blob/master/LICENSE", - "Needs Manual Check": false, - "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/intel%2Fisa-l" + "License": "not found", + "Permission to redistribute": true, + "Retrieved from": "https://raw.githubusercontent.com/intel/isa-l/refs/heads/master/LICENSE" }, "ISL/0.26-GCCcore-12.3.0": { - "License": "not found", - "Needs Manual Check": true, - "Homepage": "https://libisl.sourceforge.io", - "Source url": "https://libisl.sourceforge.io" + "License": "MIT", + "Permission to redistribute": true, + "Retrieved from": "https://libisl.sourceforge.io/user.html#License" }, "ITSTool/2.0.7-GCCcore-12.3.0": { - "License": [ - "GPL-3.0+" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=http%3A%2F%2Fitstool.org%2F" + "License": "GPL-3.0+", + "Permission to redistribute": true, + "Retrieved from": "http://itstool.org/" }, +# needs proper attribution "ImageMagick/7.1.1-34-GCCcore-13.2.0": { - "License": [ - "ImageMagick" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fwww.imagemagick.org%2F" + "License": "ImageMagick", + "Permission to redistribute": false, + "Retrieved from": "https://www.imagemagick.org/" }, "Imath/3.1.9-GCCcore-13.2.0": { - "License": "https://imath.readthedocs.io/en/latest/license.html#license", - "Needs Manual Check": false, - "Retrieved from": "https://imath.readthedocs.io/en/latest/" + "License": "BSC-3-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://imath.readthedocs.io/en/latest/license.html#license" }, "JasPer/4.0.0-GCCcore-13.2.0": { - "License": [ - "Other" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fwww.ece.uvic.ca%2F~frodo%2Fjasper%2F" + "License": "MIT", + "Permission to redistribute": true, + "Retrieved from": "https://www.ece.uvic.ca/~frodo/jasper/" }, "Java/17.0.6": { - "License": [ - "Other" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=http%3A%2F%2Fopenjdk.java.net" + "License": "gplv2+ce", + "Permission to redistribute": true, + "Retrieved from": "https://openjdk.org/legal/gplv2+ce.html" }, "JsonCpp/1.9.5-GCCcore-12.3.0": { - "License": "https://github.com/open-source-parsers/jsoncpp/blob/master/LICENSE", - "Needs Manual Check": false, - "Retrieved from": "https://open-source-parsers.github.io/jsoncpp-docs/doxygen/index.html" + "License": "mit", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/open-source-parsers/jsoncpp/blob/master/LICENSE" }, "Judy/1.0.5-GCCcore-12.3.0": { - "License": [ - "LGPL-2.0-only" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=http%3A%2F%2Fjudy.sourceforge.net%2F" + "License": "LGPL-2.0-only", + "Permission to redistribute": true, + "Retrieved from": "http://judy.sourceforge.net/" }, +# true with copyright notice "JupyterLab/4.0.5-GCCcore-12.3.0": { - "License": [ - "Other" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fjupyter.org%2F" + "License": "Other", + "Permission to redistribute": false, + "Retrieved from": "https://raw.githubusercontent.com/jupyterlab/jupyterlab/refs/heads/main/LICENSE" }, "JupyterNotebook/7.0.2-GCCcore-12.3.0": { - "License": [ - "Other" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fjupyter.org%2F" + "License": "BSD-3-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/jupyter/notebook/blob/main/LICENSE" }, "KaHIP/3.16-gompi-2023a": { "License": "mit", - "Needs Manual Check": false, - "Retrieved from": "https://repos.ecosyste.ms/api/v1/repositories/lookup?url=https%3A%2F%2Fgithub.com%2FKaHIP%2FKaHIP" + "Permission to redistribute": true, + "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/KaHIP%2FKaMinPar" }, +# true with copyright disclaimer "KronaTools/2.8.1-GCCcore-12.3.0": { - "License": "not found", - "Needs Manual Check": true, - "Homepage": "https://github.com/marbl/Krona/wiki/KronaTools", - "Source url": "https://github.com/marbl/Krona/releases/download/v2.8.1/" + "License": "Other", + "Permission to redistribute": false, + "Retrieved from": "https://github.com/marbl/Krona/blob/master/KronaTools/LICENSE.txt" }, "LAME/3.100-GCCcore-13.2.0": { - "License": [ - "LGPL-2.0-or-later" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=http%3A%2F%2Flame.sourceforge.net%2F" + "License": "LGPL-2.0-or-later", + "Permission to redistribute": true, + "Retrieved from": "http://lame.sourceforge.net/" }, "LAMMPS/29Aug2024-foss-2023b-kokkos": { - "License": "not found", - "Needs Manual Check": true, - "Homepage": "https://www.lammps.org", - "Source url": "N/A" + "License": "gpl-2.0", + "Permission to redistribute": true, + "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/lammps%2Flammps" }, "LERC/4.0.0-GCCcore-13.2.0": { "License": "apache-2.0", - "Needs Manual Check": false, - "Retrieved from": "https://repos.ecosyste.ms/api/v1/repositories/lookup?url=https%3A%2F%2Fgithub.com%2FEsri%2Flerc" + "Permission to redistribute": true, + "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Esri%2Flerc" }, "LHAPDF/6.5.4-GCC-12.3.0": { - "License": "not found", - "Needs Manual Check": true, - "Homepage": "http://lhapdf.hepforge.org/", - "Source url": "http://www.hepforge.org/archive/lhapdf/" + "License": "GPL-3.0", + "Permission to redistribute": true, + "Retrieved from": "https://lhapdf.hepforge.org/" }, "LLVM/16.0.6-GCCcore-13.2.0": { - "License": [ - "Apache-2.0" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fllvm.org%2F" + "License": "Apache-2.0", + "Permission to redistribute": true, + "Retrieved from": "https://llvm.org/" }, +# true with copyright disclaimer "LMDB/0.9.31-GCCcore-12.3.0": { - "License": "https://www.symas.com/symas-open-source-licenses", - "Needs Manual Check": false, - "Retrieved from": "https://symas.com/lmdb" + "License": "OpenLDAP Public Licese", + "Permission to redistribute": true, + "Retrieved from": "https://raw.githubusercontent.com/LMDB/lmdb/refs/heads/mdb.master/libraries/liblmdb/LICENSE" }, "LRBinner/0.1-foss-2023a": { "License": "gpl-2.0", - "Needs Manual Check": false, - "Retrieved from": "https://repos.ecosyste.ms/api/v1/repositories/lookup?url=https%3A%2F%2Fgithub.com%2Fanuradhawick%2FLRBinner" + "Permission to redistribute": true, + "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/anuradhawick%2FLRBinner" }, "LSD2/2.4.1-GCCcore-12.3.0": { "License": "gpl-2.0", - "Needs Manual Check": false, - "Retrieved from": "https://repos.ecosyste.ms/api/v1/repositories/lookup?url=https%3A%2F%2Fgithub.com%2Ftothuhien%2Flsd2" + "Permission to redistribute": true, + "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/tothuhien%2Flsd2" }, "LZO/2.10-GCCcore-12.3.0": { - "License": [ - "Other" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fwww.oberhumer.com%2Fopensource%2Flzo%2F" + "License": "gpl-2.0", + "Permission to redistribute": true, + "Retrieved from": "https://www.oberhumer.com/opensource/gpl.html" }, "LibTIFF/4.6.0-GCCcore-13.2.0": { - "License": "https://libtiff.gitlab.io/libtiff/project/license.html", - "Needs Manual Check": false, - "Retrieved from": "https://libtiff.gitlab.io/libtiff/" + "License": "libtiff", + "Permission to redistribute": true, + "Retrieved from": "https://libtiff.gitlab.io/libtiff/project/license.html" }, "Libint/2.7.2-GCC-12.3.0-lmax-6-cp2k": { - "License": "https://github.com/evaleev/libint/blob/master/LICENSE", - "Needs Manual Check": false, - "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/evaleev%2Flibint" + "License": "GPL-3.0", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/evaleev/libint/raw/master/LICENSE" }, "LightGBM/4.5.0-foss-2023a": { - "License": "not found", - "Needs Manual Check": true, - "Homepage": "https://lightgbm.readthedocs.io", - "Source url": "N/A" + "License": "mit", + "Permission to redistribute": true, + "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/readthedocs%2Fsphinx_rtd_theme" }, "LittleCMS/2.15-GCCcore-13.2.0": { - "License": "not found", - "Needs Manual Check": true, - "Homepage": "https://www.littlecms.com/", - "Source url": "N/A" + "License": "mit", + "Permission to redistribute": true, + "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/devcows%2Fhugo-universal-theme" }, "LoopTools/2.15-GCC-12.3.0": { - "License": "http://gnu.org/licenses/lgpl.html", - "Needs Manual Check": false, - "Retrieved from": "https://feynarts.de/looptools/" + "License": "GPL-3.0", + "Permission to redistribute": true, + "Retrieved from": "http://gnu.org/licenses/lgpl.html" }, "Lua/5.4.6-GCCcore-13.2.0": { - "License": [ - "MIT" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fwww.lua.org%2F" + "License": "MIT", + "Permission to redistribute": true, + "Retrieved from": "https://www.lua.org/" }, "MAFFT/7.520-GCC-12.3.0-with-extensions": { - "License": "https://mafft.cbrc.jp/alignment/software/license66.txt", - "Needs Manual Check": false, - "Retrieved from": "https://mafft.cbrc.jp/alignment/software/source.html" + "License": "Other", + "Permission to redistribute": true, + "Retrieved from": "https://mafft.cbrc.jp/alignment/software/license66.txt" }, "MBX/1.1.0-foss-2023a": { - "License": "https://github.com/paesanilab/MBX/blob/master/LICENSE", - "Needs Manual Check": false, - "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/paesanilab%2FMBX" + "License": "not found", + "Permission to redistribute": false, + "Retrieved from": "not found" }, "MCL/22.282-GCCcore-12.3.0": { "License": "not found", - "Needs Manual Check": true, - "Homepage": "https://micans.org/mcl/", - "Source url": "http://micans.org/mcl/src/" + "Permission to redistribute": false, + "Retrieved from": "not found" }, "MDAnalysis/2.4.2-foss-2022b": { - "License": "https://www.gnu.org/licenses/gpl-2.0.html", - "Needs Manual Check": false, - "Retrieved from": "https://www.mdanalysis.org/" + "License": "GPL-3.0", + "Permission to redistribute": true, + "Retrieved from": "https://www.gnu.org/licenses/gpl-2.0.html" }, "MDI/1.4.29-gompi-2023b": { "License": "bsd-3-clause", - "Needs Manual Check": false, - "Retrieved from": "https://repos.ecosyste.ms/api/v1/repositories/lookup?url=https%3A%2F%2Fgithub.com%2FMolSSI-MDI%2FMDI_Library" + "Permission to redistribute": true, + "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/MolSSI-MDI%2FMDI_Library" }, "METIS/5.1.0-GCCcore-12.3.0": { - "License": [ - "Other" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=http%3A%2F%2Fglaros.dtc.umn.edu%2Fgkhome%2Fmetis%2Fmetis%2Foverview" + "License": "Apache-2.0", + "Permission to redistribute": true, + "Retrieved from": "http://glaros.dtc.umn.edu/gkhome/metis/metis/overview" }, "MMseqs2/14-7e284-gompi-2023a": { - "License": "https://mmseqs.com/soedinglab/MMseqs2/blob/master/LICENSE.md", - "Needs Manual Check": false, - "Retrieved from": "https://mmseqs.com" + "License": "mit", + "Permission to redistribute": true, + "Retrieved from": "https://mmseqs.com/soedinglab/MMseqs2/blob/master/LICENSE.md" }, "MODFLOW/6.4.4-foss-2023a": { - "License": "not found", - "Needs Manual Check": true, - "Homepage": "https://www.usgs.gov/mission-areas/water-resources/science/modflow-and-related-programs", - "Source url": "https://github.com/%(github_account)s/modflow6/archive" + "License": "Public Domain", + "Permission to redistribute": true, + "Retrieved from": "https://www.usgs.gov/software/modflow-6-usgs-modular-hydrologic-model" }, "MPC/1.3.1-GCCcore-13.2.0": { - "License": [ - "LGPL-3.0-or-later" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=http%3A%2F%2Fwww.multiprecision.org%2F" + "License": "LGPL-3.0-or-later", + "Permission to redistribute": true, + "Retrieved from": "http://www.multiprecision.org/" }, "MPFR/4.2.1-GCCcore-13.2.0": { - "License": "https://www.gnu.org/licenses/lgpl-3.0.html", - "Needs Manual Check": false, - "Retrieved from": "https://www.mpfr.org" + "License": "GPL-3.0", + "Permission to redistribute": true, + "Retrieved from": "https://www.gnu.org/licenses/lgpl-3.0.html" }, "MUMPS/5.6.1-foss-2023a-metis": { - "License": "not found", - "Needs Manual Check": true, - "Homepage": "https://graal.ens-lyon.fr/MUMPS/", - "Source url": "https://graal.ens-lyon.fr/MUMPS/" + "License": "CeCILL-C", + "Permission to redistribute": true, + "Retrieved from": "http://mumps.enseeiht.fr/" }, "Mako/1.2.4-GCCcore-13.2.0": { - "License": "http://www.opensource.org/licenses/mit-license.php", - "Needs Manual Check": false, - "Retrieved from": "https://www.makotemplates.org" + "License": "cc-by-4.0", + "Permission to redistribute": true, + "Retrieved from": "http://www.opensource.org/licenses/mit-license.php" }, "MariaDB/11.6.0-GCC-12.3.0": { - "License": [ - "LGPL-2.1-or-later" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fmariadb.org%2F" + "License": "GPL-2.0-only", + "Permission to redistribute": true, + "Retrieved from": "https://mariadb.com/kb/en/mariadb-license/" }, "Mash/2.3-GCC-12.2.0": { - "License": "https://github.com/marbl/Mash/blob/master/LICENSE.txt", - "Needs Manual Check": false, - "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/marbl%2FMash" + "License": "mit", + "Permission to redistribute": true, + "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/readthedocs%2Fsphinx_rtd_theme" }, "Mesa/23.1.9-GCCcore-13.2.0": { - "License": "https://docs.mesa3d.org/license.html", - "Needs Manual Check": false, - "Retrieved from": "https://www.mesa3d.org/" + "License": "mit", + "Permission to redistribute": true, + "Retrieved from": "https://docs.mesa3d.org/license.html" }, "Meson/1.3.1-GCCcore-12.3.0": { - "License": [ - "Apache-2.0" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fmesonbuild.com" + "License": "Apache-2.0", + "Permission to redistribute": true, + "Retrieved from": "https://mesonbuild.com" }, "MetaEuk/6-GCC-12.2.0": { "License": "not found", - "Needs Manual Check": true, - "Homepage": "https://metaeuk.soedinglab.org", - "Source url": "https://github.com/soedinglab/metaeuk/archive" + "Permission to redistribute": false, + "Retrieved from": "not found" }, "MetalWalls/21.06.1-foss-2023a": { "License": "mit", - "Needs Manual Check": false, - "Retrieved from": "https://repos.ecosyste.ms/api/v1/repositories/lookup?url=https%3A%2F%2Fgitlab.com%2Fampere2%2Fmetalwalls" + "Permission to redistribute": true, + "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/gitlab.com/repositories/ampere2%2Fmetalwalls" }, "MultiQC/1.14-foss-2022b": { - "License": [ - "Other" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fmultiqc.info" + "License": "Other", + "Permission to redistribute": false, + "Retrieved from": "https://multiqc.info" }, "Mustache/1.3.3-foss-2023b": { "License": "mit", - "Needs Manual Check": false, - "Retrieved from": "https://repos.ecosyste.ms/api/v1/repositories/lookup?url=https%3A%2F%2Fgithub.com%2Fay-lab%2Fmustache" + "Permission to redistribute": true, + "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ay-lab%2Fmustache" }, "NASM/2.16.01-GCCcore-13.2.0": { - "License": [ - "BSD-2-Clause" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fwww.nasm.us%2F" + "License": "BSD-2-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://www.nasm.us/" }, "NCCL/2.18.3-GCCcore-12.3.0-CUDA-12.1.1": { "License": "not found", - "Needs Manual Check": true, - "Homepage": "https://developer.nvidia.com/nccl", - "Source url": "N/A" + "Permission to redistribute": false, + "Retrieved from": "not found" }, "NLTK/3.8.1-foss-2023b": { - "License": [ - "Other" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fwww.nltk.org%2F" + "License": "Apache-2.0", + "Permission to redistribute": true, + "Retrieved from": "https://www.nltk.org/" }, "NLopt/2.7.1-GCCcore-13.2.0": { - "License": "http://ab-initio.mit.edu/wiki/index.php/NLopt_License_and_Copyright/", - "Needs Manual Check": false, - "Retrieved from": "http://ab-initio.mit.edu/wiki/index.php/NLopt" + "License": "mit", + "Permission to redistribute": true, + "Retrieved from": "http://ab-initio.mit.edu/wiki/index.php/NLopt_License_and_Copyright/" }, "NSPR/4.35-GCCcore-13.2.0": { - "License": "not found", - "Needs Manual Check": true, - "Homepage": "https://developer.mozilla.org/en-US/docs/Mozilla/Projects/NSPR", - "Source url": "https://ftp.mozilla.org/pub/nspr/releases/v4.35/src/" + "License": "mit", + "Permission to redistribute": true, + "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/readthedocs%2Fsphinx_rtd_theme" }, "NSS/3.94-GCCcore-13.2.0": { - "License": [ - "Other" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fdeveloper.mozilla.org%2Fen-US%2Fdocs%2FMozilla%2FProjects%2FNSS" + "License": "MPL-2.0", + "Permission to redistribute": true, + "Retrieved from": "https://developer.mozilla.org/en-US/docs/Mozilla/Projects/NSS" }, "Nextflow/23.10.0": { - "License": "not found", - "Needs Manual Check": true, - "Homepage": "https://www.nextflow.io/", - "Source url": "https://github.com/nextflow-io/nextflow/releases/download/v%(version)s/" + "License": "apache-2.0", + "Permission to redistribute": true, + "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/nextflow-io%2Fnextflow" }, "Ninja/1.11.1-GCCcore-13.2.0": { - "License": [ - "Apache-2.0" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fninja-build.org%2F" + "License": "Apache-2.0", + "Permission to redistribute": true, + "Retrieved from": "https://ninja-build.org/" }, "OPARI2/2.0.8-GCCcore-13.2.0": { - "License": "https://opensource.org/licenses/BSD-3-Clause", - "Needs Manual Check": false, - "Retrieved from": "https://www.score-p.org" + "License": "cc-by-4.0", + "Permission to redistribute": true, + "Retrieved from": "https://opensource.org/licenses/BSD-3-Clause" }, "OSU-Micro-Benchmarks/7.2-gompi-2023b": { - "License": [ - "Other" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fmvapich.cse.ohio-state.edu%2Fbenchmarks%2F" + "License": "Other", + "Permission to redistribute": false, + "Retrieved from": "https://mvapich.cse.ohio-state.edu/benchmarks/" }, "OTF2/3.0.3-GCCcore-13.2.0": { - "License": "https://opensource.org/licenses/BSD-3-Clause", - "Needs Manual Check": false, - "Retrieved from": "https://www.score-p.org" + "License": "cc-by-4.0", + "Permission to redistribute": true, + "Retrieved from": "https://opensource.org/licenses/BSD-3-Clause" }, "OpenBLAS/0.3.24-GCC-13.2.0": { - "License": "not found", - "Needs Manual Check": true, - "Homepage": "http://www.openblas.net/", - "Source url": "N/A" + "License": "BSD-3-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://www.openblas.net/" }, "OpenEXR/3.2.0-GCCcore-13.2.0": { - "License": [ - "BSD-3-Clause" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fwww.openexr.com%2F" + "License": "BSD-3-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://www.openexr.com/" }, "OpenFOAM/v2406-foss-2023a": { - "License": [ - "Other" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fwww.openfoam.com%2F" + "License": "GPL-3.0-or-later", + "Permission to redistribute": true, + "Retrieved from": "https://www.openfoam.com/" }, "OpenJPEG/2.5.0-GCCcore-13.2.0": { - "License": [ - "BSD-2-Clause" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fwww.openjpeg.org%2F" + "License": "BSD-2-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://www.openjpeg.org/" }, "OpenMPI/4.1.6-GCC-13.2.0": { - "License": [ - "Other" - ], - "Needs Manual Check": false, - 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"Needs Manual Check": false, - "Retrieved from": "https://repos.ecosyste.ms/api/v1/repositories/lookup?url=https%3A%2F%2Fgithub.com%2Ftornadoweb%2Ftornado" + "Permission to redistribute": true, + "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/tornadoweb%2Ftornado" }, "tqdm/4.66.2-GCCcore-13.2.0": { - "License": "https://github.com/tqdm/tqdm/blob/master/LICENCE", - "Needs Manual Check": false, - "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/tqdm%2Ftqdm" + "License": "mit", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/tqdm/tqdm/raw/master/LICENCE" }, "typing-extensions/4.10.0-GCCcore-13.2.0": { - "License": "https://github.com/python/typing_extensions/blob/main/LICENSE", - "Needs Manual Check": false, - "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/python%2Ftyping_extensions" + "License": "GPL-3.0", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/python/typing_extensions/raw/main/LICENSE" }, "unixODBC/2.3.12-GCCcore-12.3.0": { - "License": [ - "LGPL-2.0-or-later" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fwww.unixodbc.org%2F" + "License": "LGPL-2.0-or-later", + "Permission to redistribute": true, + "Retrieved from": "https://www.unixodbc.org/" }, "utf8proc/2.9.0-GCCcore-13.2.0": { - "License": "https://github.com/JuliaStrings/utf8proc/blob/master/LICENSE.md", - "Needs Manual Check": false, - "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/JuliaStrings%2Futf8proc" + "License": "not found", + "Permission to redistribute": false, + "Retrieved from": "not found" }, "virtualenv/20.24.6-GCCcore-13.2.0": { "License": "mit", - "Needs Manual Check": false, - "Retrieved from": "https://repos.ecosyste.ms/api/v1/repositories/lookup?url=https%3A%2F%2Fgithub.com%2Fpypa%2Fvirtualenv" + "Permission to redistribute": true, + "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pypa%2Fvirtualenv" }, "waLBerla/6.1-foss-2023a": { "License": "not found", - "Needs Manual Check": true, - "Homepage": "https://walberla.net/index.html", - "Source url": "https://i10git.cs.fau.de/walberla/walberla/-/archive/v6.1" + "Permission to redistribute": false, + "Retrieved from": "not found" }, "wget/1.24.5-GCCcore-12.3.0": { - "License": "https://www.gnu.org/licenses/licenses.html", - "Needs Manual Check": false, - "Retrieved from": "https://www.gnu.org/software/wget" + "License": "GPL-3.0", + "Permission to redistribute": true, + "Retrieved from": "https://www.gnu.org/licenses/licenses.html" }, "wradlib/2.0.3-foss-2023a": { - "License": "https://docs.wradlib.org/#license", - "Needs Manual Check": false, - "Retrieved from": "https://docs.wradlib.org/" + "License": "mit", + "Permission to redistribute": true, + "Retrieved from": "https://docs.wradlib.org/#license" }, "wrapt/1.15.0-gfbf-2023a": { - "License": "https://pypi.org/search/?c=License+%3A%3A+OSI+Approved+%3A%3A+BSD+License", - "Needs Manual Check": false, - "Retrieved from": "https://pypi.org/project/wrapt/" + "License": "not found", + "Permission to redistribute": false, + "Retrieved from": "https://pypi.org/search/?c=License+%3A%3A+OSI+Approved+%3A%3A+BSD+License" }, "wxWidgets/3.2.6-GCC-13.2.0": { "License": "not found", - "Needs Manual Check": true, - "Homepage": "https://www.wxwidgets.org", - "Source url": "N/A" + "Permission to redistribute": false, + "Retrieved from": "https://raw.githubusercontent.com/wxWidgets/wxWidgets/refs/heads/master/docs/licence.txt" }, "x264/20231019-GCCcore-13.2.0": { - "License": [ - "GPL-2.0-or-later" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fwww.videolan.org%2Fdevelopers%2Fx264.html" + "License": "GPL-2.0-or-later", + "Permission to redistribute": true, + "Retrieved from": "https://www.videolan.org/developers/x264.html" }, "x265/3.5-GCCcore-13.2.0": { - "License": "https://www.x265.org/x265-licensees/", - "Needs Manual Check": false, - "Retrieved from": "https://x265.org/" + "License": "not found", + "Permission to redistribute": false, + "Retrieved from": "https://www.x265.org/" }, "xarray/2023.9.0-gfbf-2023a": { "License": "apache-2.0", - "Needs Manual Check": false, - "Retrieved from": "https://repos.ecosyste.ms/api/v1/repositories/lookup?url=https%3A%2F%2Fgithub.com%2Fpydata%2Fxarray" + "Permission to redistribute": true, + "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pydata%2Fxarray" }, "xorg-macros/1.20.0-GCCcore-13.2.0": { "License": "mit", - "Needs Manual Check": false, - "Retrieved from": "https://repos.ecosyste.ms/api/v1/repositories/lookup?url=https%3A%2F%2Fgitlab.freedesktop.org%2Fxorg%2Futil%2Fmacros" + "Permission to redistribute": true, + "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/gitlab.freedesktop.org/repositories/xorg%2Futil%2Fmacros" }, "xprop/1.2.6-GCCcore-12.3.0": { - "License": [ - "MIT" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fwww.x.org%2Fwiki%2F" + "License": "MIT", + "Permission to redistribute": true, + "Retrieved from": "https://www.x.org/wiki/" }, "xxHash/0.8.2-GCCcore-12.3.0": { - "License": "https://github.com/Cyan4973/xxHash/blob/dev/LICENSE", - "Needs Manual Check": false, - "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/Cyan4973%2FxxHash" + "License": "not found", + "Permission to redistribute": false, + "Retrieved from": "https://raw.githubusercontent.com/Cyan4973/xxHash/refs/heads/dev/LICENSE" }, "xxd/9.1.0307-GCCcore-13.2.0": { - "License": [ - "Other" - ], - "Needs Manual Check": false, - "Retrieved from": "https://packages.ecosyste.ms/api/v1/packages/lookup?repository_url=https%3A%2F%2Fwww.vim.org" + "License": "vim", + "Permission to redistribute": true, + "Retrieved from": "https://www.vim.org" }, "yell/2.2.2-GCC-12.3.0": { "License": "mit", - "Needs Manual Check": false, - "Retrieved from": "https://repos.ecosyste.ms/api/v1/repositories/lookup?url=https%3A%2F%2Fgithub.com%2Frudionrails%2Fyell" + "Permission to redistribute": true, + "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/rudionrails%2Fyell" }, "yelp-tools/42.1-GCCcore-12.3.0": { "License": "gpl-2.0+", - "Needs Manual Check": false, - "Retrieved from": "https://repos.ecosyste.ms/api/v1/repositories/lookup?url=https%3A%2F%2Fgitlab.gnome.org%2FGNOME%2Fyelp-tools" + "Permission to redistribute": true, + "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/gitlab.gnome.org/repositories/GNOME%2Fyelp-tools" }, "yelp-xsl/42.1-GCCcore-12.3.0": { "License": "not found", - "Needs Manual Check": true, - "Homepage": "https://gitlab.gnome.org/GNOME/yelp-xslg", - "Source url": "https://gitlab.gnome.org/GNOME/yelp-xsl/-/archive/42.1/" + "Permission to redistribute": false, + "Retrieved from": "https://gitlab.gnome.org/GNOME/yelp-xsl/-/raw/master/COPYING" }, "zstd/1.5.5-GCCcore-13.2.0": { - "License": "not found", - "Needs Manual Check": true, - "Homepage": "https://facebook.github.io/zstd", - "Source url": "N/A" + "License": "BSD-3-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/facebook/zstd/blob/dev/LICENSE" } } From a267a0081533b69b7dba69a42d86f26b161a1bc2 Mon Sep 17 00:00:00 2001 From: torri Date: Tue, 11 Mar 2025 21:12:35 +0100 Subject: [PATCH 08/10] got it! --- licenses/licenses.json | 490 +++++++++++++++++++++-------------------- 1 file changed, 246 insertions(+), 244 deletions(-) diff --git a/licenses/licenses.json b/licenses/licenses.json index 6c06e5fc6b..6af78e63bf 100644 --- a/licenses/licenses.json +++ b/licenses/licenses.json @@ -535,9 +535,9 @@ "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/iqtree%2Fiqtree2" }, "ISA-L/2.30.0-GCCcore-12.3.0": { - "License": "not found", + "License": "BSD-3-Clause", "Permission to redistribute": true, - "Retrieved from": "https://raw.githubusercontent.com/intel/isa-l/refs/heads/master/LICENSE" + "Retrieved from": "https://github.com/intel/isa-l/blob/master/LICENSE" }, "ISL/0.26-GCCcore-12.3.0": { "License": "MIT", @@ -552,7 +552,7 @@ # needs proper attribution "ImageMagick/7.1.1-34-GCCcore-13.2.0": { "License": "ImageMagick", - "Permission to redistribute": false, + "Permission to redistribute": true, "Retrieved from": "https://www.imagemagick.org/" }, "Imath/3.1.9-GCCcore-13.2.0": { @@ -582,8 +582,8 @@ }, # true with copyright notice "JupyterLab/4.0.5-GCCcore-12.3.0": { - "License": "Other", - "Permission to redistribute": false, + "License": "BSD-3-Clause", + "Permission to redistribute": true, "Retrieved from": "https://raw.githubusercontent.com/jupyterlab/jupyterlab/refs/heads/main/LICENSE" }, "JupyterNotebook/7.0.2-GCCcore-12.3.0": { @@ -598,9 +598,9 @@ }, # true with copyright disclaimer "KronaTools/2.8.1-GCCcore-12.3.0": { - "License": "Other", - "Permission to redistribute": false, - "Retrieved from": "https://github.com/marbl/Krona/blob/master/KronaTools/LICENSE.txt" + "License": "BSD-3-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/marbl/Krona/blob/master/LICENSE.txt" }, "LAME/3.100-GCCcore-13.2.0": { "License": "LGPL-2.0-or-later", @@ -684,14 +684,14 @@ "Retrieved from": "https://mafft.cbrc.jp/alignment/software/license66.txt" }, "MBX/1.1.0-foss-2023a": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "MIT", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/paesanilab/MBX" }, "MCL/22.282-GCCcore-12.3.0": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "GPL-3.0", + "Permission to redistribute": true, + "Retrieved from": "https://micans.org/mcl/" }, "MDAnalysis/2.4.2-foss-2022b": { "License": "GPL-3.0", @@ -759,9 +759,9 @@ "Retrieved from": "https://mesonbuild.com" }, "MetaEuk/6-GCC-12.2.0": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "GPL-3.0", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/soedinglab/MetaEuk" }, "MetalWalls/21.06.1-foss-2023a": { "License": "mit", @@ -769,9 +769,9 @@ "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/gitlab.com/repositories/ampere2%2Fmetalwalls" }, "MultiQC/1.14-foss-2022b": { - "License": "Other", - "Permission to redistribute": false, - "Retrieved from": "https://multiqc.info" + "License": "GPL-3.0", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/ewels/MultiQC" }, "Mustache/1.3.3-foss-2023b": { "License": "mit", @@ -784,9 +784,9 @@ "Retrieved from": "https://www.nasm.us/" }, "NCCL/2.18.3-GCCcore-12.3.0-CUDA-12.1.1": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "BSD-3-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/NVIDIA/nccl" }, "NLTK/3.8.1-foss-2023b": { "License": "Apache-2.0", @@ -824,8 +824,8 @@ "Retrieved from": "https://opensource.org/licenses/BSD-3-Clause" }, "OSU-Micro-Benchmarks/7.2-gompi-2023b": { - "License": "Other", - "Permission to redistribute": false, + "License": "BSD-3-Clause", + "Permission to redistribute": true, "Retrieved from": "https://mvapich.cse.ohio-state.edu/benchmarks/" }, "OTF2/3.0.3-GCCcore-13.2.0": { @@ -879,9 +879,9 @@ "Retrieved from": "https://github.com/coin-or/Osi/raw/master/LICENSE" }, "PAPI/7.1.0-GCCcore-13.2.0": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "BSD-3-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://icl.utk.edu/papi/" }, "PCRE/8.45-GCCcore-13.2.0": { "License": "BSD-3-Clause", @@ -894,17 +894,18 @@ "Retrieved from": "https://www.pcre.org/" }, "PDT/3.25.2-GCCcore-13.2.0": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "BSD-3-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/HPCToolkit/hpctoolkit" }, "PETSc/3.20.3-foss-2023a": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "BSD-2-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://petsc.org/release/" }, +# doesn't specify license, need permission to redistribute "PGPLOT/5.2.2-GCCcore-13.2.0": { - "License": "Public domain", + "License": "Not-Public domain", "Permission to redistribute": false, "Retrieved from": "https://sites.astro.caltech.edu/~tjp/pgplot/" }, @@ -918,10 +919,10 @@ "Permission to redistribute": true, "Retrieved from": "https://www.dabeaz.com/ply/" }, - "PMIx/4.2.6-GCCcore-13.2.0": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "PMIx/4.2.6-GCCcore-13.2.0": { "PMIx/4.2.6-GCCcore-13.2.0": { + "License": "BSD-3-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/openpmix/openpmix" }, "PROJ/9.3.1-GCCcore-13.2.0": { "License": "mit", @@ -944,8 +945,8 @@ "Retrieved from": "https://www.paraview.org" }, "Paraver/4.11.4-GCC-12.3.0": { - "License": "Other", - "Permission to redistribute": false, + "License": "GPL-3.0", + "Permission to redistribute": true, "Retrieved from": "https://tools.bsc.es/paraver" }, "Perl/5.38.0-GCCcore-13.2.0": { @@ -968,10 +969,11 @@ "Permission to redistribute": true, "Retrieved from": "https://github.com/uploadcare/pillow-simd" }, +# doesn't specify license "Pint/0.24-GCCcore-13.2.0": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "Other", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/hgrecco/pint/blob/master/LICENSE" }, "PostgreSQL/16.1-GCCcore-13.2.0": { "License": "PostgreSQL", @@ -1040,7 +1042,7 @@ }, "Qt5/5.15.13-GCCcore-13.2.0": { "License": "LGPL-2.1-only, LGPL-3.0-only, GPL-3.0-only, MulanPSL-1.0", - "Permission to redistribute": false, + "Permission to redistribute": true, "Retrieved from": "https://qt.io/" }, "QuantumESPRESSO/7.3.1-foss-2023a": { @@ -1079,9 +1081,9 @@ "Retrieved from": "https://rapidjson.org/" }, "Raptor/2.0.16-GCCcore-12.3.0": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "https://librdf.org/raptor/UPGRADING.html" + "License": "apache-2.0, LGPL-2.1-or-later, GPL-2.0", + "Permission to redistribute": true, + "Retrieved from": "https://librdf.org/raptor/LICENSE.html" }, "Rasqal/0.9.33-GCCcore-12.3.0": { "License": "LGPL-2.1", @@ -1110,7 +1112,7 @@ }, "Rust/1.76.0-GCCcore-13.2.0": { "License": "Apache-2.0, MIT", - "Permission to redistribute": false, + "Permission to redistribute": true, "Retrieved from": "https://www.rust-lang.org" }, "SAMtools/1.18-GCC-12.3.0": { @@ -1169,8 +1171,8 @@ "Retrieved from": "http://www.swig.org/" }, "ScaFaCoS/1.0.4-foss-2023b": { - "License": "Other", - "Permission to redistribute": false, + "License": "GPL-3.0", + "Permission to redistribute": true, "Retrieved from": "http://www.scafacos.de/" }, "ScaLAPACK/2.2.0-gompi-2023b": { @@ -1219,9 +1221,9 @@ "Retrieved from": "https://github.com/DrTimothyAldenDavis/SuiteSparse/raw/dev/LICENSE.txt" }, "SuperLU_DIST/8.1.2-foss-2023a": { - "License": "Other", - "Permission to redistribute": false, - "Retrieved from": "https://crd-legacy.lbl.gov/~xiaoye/SuperLU/" + "License": "BSD-3-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/xiaoyeli/superlu_dist" }, "Szip/2.1.1-GCCcore-13.2.0": { "License": "Szip License", @@ -1269,14 +1271,14 @@ "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/openucx%2Fucc" }, "UCX/1.15.0-GCCcore-13.2.0": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "BSD-3-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/openucx/ucx" }, "UCX-CUDA/1.14.1-GCCcore-12.3.0-CUDA-12.1.1": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "BSD-3-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/openucx/ucx" }, "UDUNITS/2.2.28-GCCcore-13.2.0": { "License": "BSD-3-Clause", @@ -1388,10 +1390,10 @@ "Permission to redistribute": true, "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/hpc-carpentry%2Famdahl" }, - "archspec/0.2.5-GCCcore-12.3.0": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "archspec/0.2.5-GCCcore-12.3.0": { + "License": "MIT", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/archspec/archspec" }, "arpack-ng/3.9.0-foss-2023b": { "License": "BSD-3-Clause", @@ -1464,9 +1466,9 @@ "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/open2c%2Fcooler" }, "cpio/2.15-GCCcore-12.3.0": { - "License": "aladdin", - "Permission to redistribute": false, - "Retrieved from": "https://www.gnu.org/licenses/license-list.html" + "License": "GPL-2.0", + "Permission to redistribute": true, + "Retrieved from": " https://ftp.gnu.org/gnu/cpio/" }, "cppy/1.2.1-GCCcore-13.2.0": { "License": "bsd-3-clause", @@ -1474,9 +1476,9 @@ "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/nucleic%2Fcppy" }, "crb-blast/0.6.9-GCC-12.3.0": { - "License": null, - "Permission to redistribute": false, - "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/cboursnell%2Fcrb-blast" + "License": "MIT", + "Permission to redistribute": true, + "Retrieved from": "https://rubygems.org/gems/crb-blast/versions/0.6.9" }, "cryptography/41.0.5-GCCcore-13.2.0": { "License": "Apache-2.0", @@ -1509,9 +1511,9 @@ "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/readthedocs%2Fsphinx_rtd_theme" }, "ecCodes/2.31.0-gompi-2023b": { - "License": "Other", - "Permission to redistribute": false, - "Retrieved from": "https://software.ecmwf.int/wiki/display/ECC/ecCodes+Home" + "License": "apache-2.0", + "Permission to redistribute": true, + "Retrieved from": "https://confluence.ecmwf.int/display/ECC/License" }, "elfutils/0.190-GCCcore-13.2.0": { "License": "GPL-3.0", @@ -1599,9 +1601,9 @@ "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/geopandas%2Fgeopandas" }, "gfbf/2023b": { - "License": "Other", - "Permission to redistribute": false, - "Retrieved from": "(none)" + "License": "Various", + "Permission to redistribute": true, + "Retrieved from": "https://easybuild.io/" }, "giflib/5.2.1-GCCcore-13.2.0": { "License": "MIT", @@ -1644,13 +1646,13 @@ "Retrieved from": "https://github.com/silnrsi/graphite" }, "groff/1.22.4-GCCcore-12.3.0": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "https://www.gnu.org/licenses/why-assign.html" + "License": "GPL-3.0", + "Permission to redistribute": true, + "Retrieved from": "https://layers.openembedded.org/layerindex/recipe/150214/" }, "grpcio/1.57.0-GCCcore-12.3.0": { "License": "Apache-2.0, BSD-3-Clause, MIT", - "Permission to redistribute": false, + "Permission to redistribute": true, "Retrieved from": "https://grpc.io/" }, "gtk-doc/1.34.0-GCCcore-12.3.0": { @@ -1664,24 +1666,24 @@ "Retrieved from": "https://www.gnu.org/software/gzip/" }, "h5netcdf/1.2.0-foss-2023a": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "https://h5netcdf.org/#license" + "License": "MIT", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/h5netcdf/h5netcdf" }, "h5py/3.11.0-foss-2023b": { - "License": "Other", - "Permission to redistribute": false, - "Retrieved from": "https://www.h5py.org/" + "License": "BSD-3-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/h5py/h5py" }, "hatch-jupyter-builder/0.9.1-GCCcore-12.3.0": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "BSD-3-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/jupyterlab/hatch-jupyter-builder" }, "hatchling/1.18.0-GCCcore-13.2.0": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "MIT", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/pypa/hatch" }, "hic-straw/1.3.1-foss-2023b": { "License": "mit", @@ -1694,14 +1696,14 @@ "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/redis%2Fhiredis" }, "hwloc/2.9.2-GCCcore-13.2.0": { - "License": "Other", - "Permission to redistribute": false, - "Retrieved from": "https://www.open-mpi.org/projects/hwloc/" + "License": "BSD-3-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://www.open-mpi.org/projects/hwloc/license.php" }, "hypothesis/6.90.0-GCCcore-13.2.0": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "MPL-2.0", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/HypothesisWorks/hypothesis" }, "ipympl/0.9.3-gfbf-2023a": { "License": "bsd-3-clause", @@ -1709,8 +1711,8 @@ "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/matplotlib%2Fipympl" }, "jbigkit/2.1-GCCcore-13.2.0": { - "License": "Other", - "Permission to redistribute": false, + "License": "GPL-2.0", + "Permission to redistribute": true, "Retrieved from": "https://www.cl.cam.ac.uk/~mgk25/jbigkit/" }, "jedi/0.19.1-GCCcore-13.2.0": { @@ -1724,24 +1726,24 @@ "Retrieved from": "http://jemalloc.net" }, "jq/1.6-GCCcore-12.2.0": { - "License": "Other", - "Permission to redistribute": false, - "Retrieved from": "https://stedolan.github.io/jq/" + "License": "MIT", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/stedolan/jq" }, "json-c/0.17-GCCcore-13.2.0": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "MIT", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/json-c/json-c" }, "jupyter-server/2.7.2-GCCcore-12.3.0": { - "License": "Other", - "Permission to redistribute": false, - "Retrieved from": "https://jupyter.org/" + "License": "BSD-3-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/jupyter-server/jupyter_server" }, "kim-api/2.3.0-GCC-13.2.0": { - "License": "Other", - "Permission to redistribute": false, - "Retrieved from": "https://openkim.org/" + "License": "LGPL-2.1", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/openkim/kim-api" }, "libGLU/9.0.3-GCCcore-13.2.0": { "License": "mit", @@ -1759,14 +1761,14 @@ "Retrieved from": "https://pagure.io/libaio" }, "libarchive/3.7.2-GCCcore-13.2.0": { - "License": "BSD-2-Clause, BSD-3-Clause", - "Permission to redistribute": false, - "Retrieved from": "https://www.libarchive.org/" + "License": "BSD-2-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/libarchive/libarchive" }, "libcerf/2.3-GCCcore-12.3.0": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "https://jugit.fz-juelich.de/mlz/libcerf/-/blob/main/LICENSE" + "License": "MIT", + "Permission to redistribute": true, + "Retrieved from": "https://jugit.fz-juelich.de/mlz/libcerf" }, "libcint/5.4.0-gfbf-2023a": { "License": "apache-2.0", @@ -1780,7 +1782,7 @@ }, "libdrm/2.4.117-GCCcore-13.2.0": { "License": "Other", - "Permission to redistribute": false, + "Permission to redistribute": true, "Retrieved from": "https://dri.freedesktop.org/libdrm/" }, "libdwarf/0.9.2-GCCcore-13.2.0": { @@ -1814,9 +1816,9 @@ "Retrieved from": "https://creativecommons.org/licenses/by-sa/3.0/" }, "libgd/2.3.3-GCCcore-12.3.0": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "BSD-3-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/libgd/libgd" }, "libgeotiff/1.7.3-GCCcore-13.2.0": { "License": "gfdl-1.3", @@ -1824,14 +1826,14 @@ "Retrieved from": "http://static.fsf.org/nosvn/directory/fdl-1.3-standalone.html" }, "libgit2/1.7.2-GCCcore-13.2.0": { - "License": "BSD-3-Clause-Attribution", - "Permission to redistribute": false, - "Retrieved from": "https://libgit2.org/" + "License": "GPL-2.0", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/libgit2/libgit2" }, "libglvnd/1.7.0-GCCcore-13.2.0": { - "License": null, - "Permission to redistribute": false, - "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/gitlab.freedesktop.org/repositories/glvnd%2Flibglvnd" + "License": "MIT", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/NVIDIA/libglvnd" }, "libgpg-error/1.48-GCCcore-12.3.0": { "License": "cc-by-4.0", @@ -1849,9 +1851,9 @@ "Retrieved from": "http://www.gnu.org/licenses/licenses.html" }, "libjpeg-turbo/3.0.1-GCCcore-13.2.0": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "BSD-3-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/libjpeg-turbo/libjpeg-turbo" }, "libogg/1.3.5-GCCcore-13.2.0": { "License": "BSD-3-Clause", @@ -1865,18 +1867,18 @@ }, "libpciaccess/0.17-GCCcore-13.2.0": { "License": "Other", - "Permission to redistribute": false, - "Retrieved from": "https://cgit.freedesktop.org/xorg/lib/libpciaccess/" + "Permission to redistribute": true, + "Retrieved from": "https://gitlab.freedesktop.org/xorg/lib/libpciaccess/-/raw/master/COPYING?ref_type=heads" }, "libpng/1.6.40-GCCcore-13.2.0": { "License": "Libpng", - "Permission to redistribute": false, + "Permission to redistribute": true, "Retrieved from": "http://www.libpng.org/pub/png/libpng.html" }, "librosa/0.10.1-foss-2023a": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "ISC", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/librosa/librosa" }, "libsndfile/1.2.2-GCCcore-13.2.0": { "License": "LGPL-2.0+", @@ -1909,9 +1911,9 @@ "Retrieved from": "https://xiph.org/vorbis/" }, "libvori/220621-GCCcore-12.3.0": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "LGPL-3.0", + "Permission to redistribute": true, + "Retrieved from": "https://brehm-research.de/libvori.php" }, "libwebp/1.3.2-GCCcore-13.2.0": { "License": "BSD-3-Clause", @@ -1919,24 +1921,24 @@ "Retrieved from": "https://developers.google.com/speed/webp/" }, "libxc/6.2.2-GCC-12.3.0": { - "License": "Other", - "Permission to redistribute": false, - "Retrieved from": "https://libxc.gitlab.io" + "License": "LGPL-3.0", + "Permission to redistribute": true, + "Retrieved from": "https://gitlab.com/libxc/libxc" }, "libxml2/2.11.5-GCCcore-13.2.0": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "MIT", + "Permission to redistribute": true, + "Retrieved from": "https://gitlab.gnome.org/GNOME/libxml2" }, "libxml2-python/2.11.4-GCCcore-12.3.0": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "MIT", + "Permission to redistribute": true, + "Retrieved from": "https://gitlab.gnome.org/GNOME/libxml2" }, "libxslt/1.1.38-GCCcore-13.2.0": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "MIT", + "Permission to redistribute": true, + "Retrieved from": "https://gitlab.gnome.org/GNOME/libxslt" }, "libxsmm/1.17-GCC-12.3.0": { "License": "bsd-3-clause", @@ -1949,19 +1951,19 @@ "Retrieved from": "https://pyyaml.org/wiki/LibYAML" }, "lpsolve/5.5.2.11-GCC-12.2.0": { - "License": "Other", - "Permission to redistribute": false, + "License": "LGPL-2.1", + "Permission to redistribute": true, "Retrieved from": "https://sourceforge.net/projects/lpsolve/" }, "lxml/4.9.3-GCCcore-13.2.0": { "License": "BSD-3-Clause, ZPL-2.0", - "Permission to redistribute": false, + "Permission to redistribute": true, "Retrieved from": "https://lxml.de/" }, "lz4/1.9.4-GCCcore-13.2.0": { - "License": "Other", - "Permission to redistribute": false, - "Retrieved from": "https://lz4.github.io/lz4/" + "License": "BSD-2-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/lz4/lz4" }, "make/4.4.1-GCCcore-13.2.0": { "License": "GPL-3.0", @@ -1999,14 +2001,14 @@ "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/chriscave%2Fmpl_ascii" }, "multiprocess/0.70.16-gfbf-2023b": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "other", + "Permission to redistribute": true, + "Retrieved from": "https://raw.githubusercontent.com/uqfoundation/multiprocess/refs/heads/master/COPYING" }, "ncbi-vdb/3.0.10-gompi-2023a": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "Public Domain", + "Permission to redistribute": true, + "Retrieved from": "https://raw.githubusercontent.com/ncbi/ncbi-vdb/refs/heads/master/LICENSE" }, "ncdu/1.18-GCC-12.3.0": { "License": "MIT", @@ -2034,9 +2036,9 @@ "Retrieved from": "https://www.lysator.liu.se/~nisse/nettle/" }, "networkx/3.2.1-gfbf-2023b": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "https://pypi.python.org/search/?c=License+%3A%3A+OSI+Approved+%3A%3A+BSD+License" + "License": "BSD-3-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://raw.githubusercontent.com/networkx/networkx/refs/heads/main/LICENSE.txt" }, "nlohmann_json/3.11.3-GCCcore-13.2.0": { "License": "mit", @@ -2059,9 +2061,9 @@ "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/numactl%2Fnumactl" }, "numba/0.58.1-foss-2023a": { - "License": "Other", - "Permission to redistribute": false, - "Retrieved from": "https://numba.pydata.org/" + "License": "BSD-2-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/numba/numba" }, "occt/7.8.0-GCCcore-12.3.0": { "License": "lgpl-2.1", @@ -2074,9 +2076,9 @@ "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ijl%2Forjson" }, "parallel/20230722-GCCcore-12.2.0": { - "License": "aladdin", - "Permission to redistribute": false, - "Retrieved from": "https://www.gnu.org/licenses/license-list.html" + "License": "GPL-3.0", + "Permission to redistribute": true, + "Retrieved from": "https://savannah.gnu.org/projects/parallel/" }, "patchelf/0.18.0-GCCcore-13.2.0": { "License": "gpl-3.0", @@ -2084,14 +2086,14 @@ "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/NixOS%2Fpatchelf" }, "pixman/0.42.2-GCCcore-13.2.0": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "MIT", + "Permission to redistribute": true, + "Retrieved from": "https://gitlab.freedesktop.org/pixman/pixman" }, "pkgconf/2.0.3-GCCcore-13.2.0": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "ISC", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/pkgconf/pkgconf" }, "pkgconfig/1.5.5-GCCcore-12.3.0-python": { "License": "mit", @@ -2104,29 +2106,29 @@ "Retrieved from": "https://python-poetry.org" }, "protobuf/24.0-GCCcore-12.3.0": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "BSD-3-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/protocolbuffers/protobuf" }, "protobuf-python/4.24.0-GCCcore-12.3.0": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "BSD-3-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/protocolbuffers/protobuf" }, "psycopg2/2.9.9-GCCcore-12.3.0": { - "License": "Other", - "Permission to redistribute": false, - "Retrieved from": "https://psycopg.org/" + "License": "LGPL-3.0", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/psycopg/psycopg2" }, "pyMBE/0.8.0-foss-2023b": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "MIT", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/pyMBE-dev/pyMBE" }, "pybind11/2.11.1-GCCcore-13.2.0": { - "License": "Other", - "Permission to redistribute": false, - "Retrieved from": "https://pybind11.readthedocs.io" + "License": "BSD-3-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/pybind/pybind11" }, "pydantic/2.7.4-GCCcore-13.2.0": { "License": "mit", @@ -2134,14 +2136,14 @@ "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pydantic%2Fpydantic" }, "pyfaidx/0.8.1.1-GCCcore-13.2.0": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "https://pypi.python.org/search/?c=License+%3A%3A+OSI+Approved+%3A%3A+BSD+License" + "License": "MIT", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/mdshw5/pyfaidx" }, "pyproj/3.6.0-GCCcore-12.3.0": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "MIT", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/pyproj4/pyproj" }, "pystencils/1.3.4-gfbf-2023b": { "License": "mit", @@ -2149,14 +2151,14 @@ "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/readthedocs%2Fsphinx_rtd_theme" }, "pytest-flakefinder/1.1.0-GCCcore-12.3.0": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "MIT", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/dropbox/pytest-flakefinder" }, "pytest-rerunfailures/12.0-GCCcore-12.3.0": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "MIT", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/pytest-dev/pytest-rerunfailures" }, "pytest-shard/0.1.2-GCCcore-12.3.0": { "License": "mit", @@ -2169,9 +2171,9 @@ "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/casacore%2Fpython-casacore" }, "python-isal/1.1.0-GCCcore-12.3.0": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "MIT", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/pycompression/python-isal" }, "python-xxhash/3.4.1-GCCcore-12.3.0": { "License": "bsd-2-clause", @@ -2179,24 +2181,24 @@ "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ifduyue%2Fpython-xxhash" }, "re2c/3.1-GCCcore-13.2.0": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "https://re2c.org#license" + "License": "Public Domain", + "Permission to redistribute": true, + "Retrieved from": "https://re2c.org" }, "rpy2/3.5.15-foss-2023a": { - "License": "Other", - "Permission to redistribute": false, - "Retrieved from": "https://rpy2.github.io" + "License": "GPL-2.0", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/rpy2/rpy2" }, "scikit-build/0.17.6-GCCcore-13.2.0": { - "License": null, - "Permission to redistribute": false, - "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/scikit-build%2Fscikit-build-sample-projects" + "License": "MIT", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/scikit-build/scikit-build" }, "scikit-build-core/0.9.3-GCCcore-13.2.0": { - "License": "Other", - "Permission to redistribute": false, - "Retrieved from": "https://scikit-build.readthedocs.io/en/latest/" + "License": "MIT", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/scikit-build/scikit-build-core" }, "scikit-learn/1.4.0-gfbf-2023b": { "License": "bsd-3-clause", @@ -2219,9 +2221,9 @@ "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/gitlab.com/repositories/fastjet%2Fsiscone" }, "snakemake/8.4.2-foss-2023a": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "MIT", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/snakemake/snakemake" }, "snappy/1.1.10-GCCcore-13.2.0": { "License": "mit", @@ -2239,9 +2241,9 @@ "Retrieved from": "https://www.statsmodels.org/" }, "sympy/1.12-gfbf-2023b": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "BSD-3-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/sympy/sympy" }, "tbb/2021.13.0-GCCcore-13.2.0": { "License": "apache-2.0", @@ -2284,9 +2286,9 @@ "Retrieved from": "https://www.unixodbc.org/" }, "utf8proc/2.9.0-GCCcore-13.2.0": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "MIT", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/JuliaStrings/utf8proc" }, "virtualenv/20.24.6-GCCcore-13.2.0": { "License": "mit", @@ -2294,9 +2296,9 @@ "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/pypa%2Fvirtualenv" }, "waLBerla/6.1-foss-2023a": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "not found" + "License": "GPL-3.0", + "Permission to redistribute": true, + "Retrieved from": "https://www.walberla.net/" }, "wget/1.24.5-GCCcore-12.3.0": { "License": "GPL-3.0", @@ -2309,13 +2311,13 @@ "Retrieved from": "https://docs.wradlib.org/#license" }, "wrapt/1.15.0-gfbf-2023a": { - "License": "not found", - "Permission to redistribute": false, - "Retrieved from": "https://pypi.org/search/?c=License+%3A%3A+OSI+Approved+%3A%3A+BSD+License" + "License": "BSD-2-Clause", + "Permission to redistribute": true, + "Retrieved from": "https://github.com/GrahamDumpleton/wrapt" }, "wxWidgets/3.2.6-GCC-13.2.0": { - "License": "not found", - "Permission to redistribute": false, + "License": "GPL-2.0", + "Permission to redistribute": true, "Retrieved from": "https://raw.githubusercontent.com/wxWidgets/wxWidgets/refs/heads/master/docs/licence.txt" }, "x264/20231019-GCCcore-13.2.0": { @@ -2324,8 +2326,8 @@ "Retrieved from": "https://www.videolan.org/developers/x264.html" }, "x265/3.5-GCCcore-13.2.0": { - "License": "not found", - "Permission to redistribute": false, + "License": "GPL-2.0", + "Permission to redistribute": true, "Retrieved from": "https://www.x265.org/" }, "xarray/2023.9.0-gfbf-2023a": { @@ -2344,8 +2346,8 @@ "Retrieved from": "https://www.x.org/wiki/" }, "xxHash/0.8.2-GCCcore-12.3.0": { - "License": "not found", - "Permission to redistribute": false, + "License": "BSD-2-Clause", + "Permission to redistribute": true, "Retrieved from": "https://raw.githubusercontent.com/Cyan4973/xxHash/refs/heads/dev/LICENSE" }, "xxd/9.1.0307-GCCcore-13.2.0": { @@ -2364,8 +2366,8 @@ "Retrieved from": "https://repos.ecosyste.ms/api/v1/hosts/gitlab.gnome.org/repositories/GNOME%2Fyelp-tools" }, "yelp-xsl/42.1-GCCcore-12.3.0": { - "License": "not found", - "Permission to redistribute": false, + "License": "LGPL-2.1-only", + "Permission to redistribute": true, "Retrieved from": "https://gitlab.gnome.org/GNOME/yelp-xsl/-/raw/master/COPYING" }, "zstd/1.5.5-GCCcore-13.2.0": { From e50b25c34387bbd15f792728cc4709721b2ffab7 Mon Sep 17 00:00:00 2001 From: torri Date: Mon, 7 Apr 2025 15:40:08 +0200 Subject: [PATCH 09/10] cleaning and reworking --- .github/workflows/check_licenses.yml | 47 ++++++---------------------- .github/workflows/test_licenses.yml | 4 --- 2 files changed, 10 insertions(+), 41 deletions(-) diff --git a/.github/workflows/check_licenses.yml b/.github/workflows/check_licenses.yml index 17fd9c982e..dac5a2f407 100644 --- a/.github/workflows/check_licenses.yml +++ b/.github/workflows/check_licenses.yml @@ -5,8 +5,9 @@ on: branches: [ "*-software.eessi.io" ] pull_request: branches: [ "*-software.eessi.io" ] + types: [opened, synchronized] permissions: - contents: write # set permissions for writing + contents: read # we dont need to write jobs: license_update: @@ -14,46 +15,18 @@ jobs: steps: - name: Checkout out software-layer repository - uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 + uses: actions/checkout@v4 + with: + fetch-depth: 0 - name: Set up Python uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c with: python-version: '3.9' - - name: Run license script and generate patch - id: check_licenses - env: - GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} - run: | - python update_licenses.py --source=pypi TensorFlow - python update_licenses.py --source=github:easybuilders/easybuild EasyBuild - if [ -f license_update.patch ] && [ -s license_update.patch ]; then - PATCH_CONTENT=$(cat license_update.patch) - echo "patch=$PATCH_CONTENT" >> $GITHUB_OUTPUT - fi - - - name: Create a PR (if changes detected) - id: create_pull_request - uses: peter-evans/create-pull-request@5e914681df9dc83aa4e4905692ca88beb2f9e91f # v7.0.5 - if: steps.check_licenses.outputs.patch != '' - with: - commit-message: "Auto PR: Update licenses" - title: "Auto PR: Update licenses" - body: ${{ steps.check_licenses.outputs.patch }} - branch: update-licenses-${{ github.run_number }} - base: [ "*-software.eessi.io" ] - - - name: Apply patch (if no PR created) - if: steps.create_pull_request.outputs.number == '' && steps.check_licenses.outputs.patch != '' + - name: Check if an EasyStack has been modified + id: diff run: | - if [ -f license_update.patch ] && [ -s license_update.patch ]; then - git apply license_update.patch - else - echo "No changes to apply" - fi - git add licenses.json - git diff --cached --exit-code || git commit -m "Update licenses.json" - git push - env: - GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} + git fetch origin ${{ github.base_ref }} + echo "🔍 Files changed between PR and base branch:" + git diff --name-only origin/${{ github.base_ref }} HEAD | grep ".yml" diff --git a/.github/workflows/test_licenses.yml b/.github/workflows/test_licenses.yml index bf6965c620..5cfb98006d 100644 --- a/.github/workflows/test_licenses.yml +++ b/.github/workflows/test_licenses.yml @@ -17,7 +17,3 @@ jobs: uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c # v5.0.0 with: python-version: '3.9' - - - name: Check software licenses - run: | - python licenses/spdx.py licenses/licenses.json From f224575ad3fc76bb217584800fb06e957ddc0437 Mon Sep 17 00:00:00 2001 From: torri Date: Mon, 7 Apr 2025 15:44:57 +0200 Subject: [PATCH 10/10] cleaning files --- .github/workflows/test_licenses.yml | 19 ---------- licenses/check_licenses.yml | 59 ----------------------------- 2 files changed, 78 deletions(-) delete mode 100644 .github/workflows/test_licenses.yml delete mode 100644 licenses/check_licenses.yml diff --git a/.github/workflows/test_licenses.yml b/.github/workflows/test_licenses.yml deleted file mode 100644 index 5cfb98006d..0000000000 --- a/.github/workflows/test_licenses.yml +++ /dev/null @@ -1,19 +0,0 @@ -# documentation: https://help.github.com/en/articles/workflow-syntax-for-github-actions -name: Test software licenses -on: - push: - branches: [ "*-software.eessi.io" ] - pull_request: -permissions: - contents: read # to fetch code (actions/checkout) -jobs: - build: - runs-on: ubuntu-latest - steps: - - name: Check out software-layer repository - uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # v4.1.1 - - - name: set up Python - uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c # v5.0.0 - with: - python-version: '3.9' diff --git a/licenses/check_licenses.yml b/licenses/check_licenses.yml deleted file mode 100644 index 17fd9c982e..0000000000 --- a/licenses/check_licenses.yml +++ /dev/null @@ -1,59 +0,0 @@ -name: Check and update licenses - -on: - push: - branches: [ "*-software.eessi.io" ] - pull_request: - branches: [ "*-software.eessi.io" ] -permissions: - contents: write # set permissions for writing - -jobs: - license_update: - runs-on: ubuntu-latest - - steps: - - name: Checkout out software-layer repository - uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 - - - name: Set up Python - uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c - with: - python-version: '3.9' - - - name: Run license script and generate patch - id: check_licenses - env: - GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} - run: | - python update_licenses.py --source=pypi TensorFlow - python update_licenses.py --source=github:easybuilders/easybuild EasyBuild - if [ -f license_update.patch ] && [ -s license_update.patch ]; then - PATCH_CONTENT=$(cat license_update.patch) - echo "patch=$PATCH_CONTENT" >> $GITHUB_OUTPUT - fi - - - name: Create a PR (if changes detected) - id: create_pull_request - uses: peter-evans/create-pull-request@5e914681df9dc83aa4e4905692ca88beb2f9e91f # v7.0.5 - if: steps.check_licenses.outputs.patch != '' - with: - commit-message: "Auto PR: Update licenses" - title: "Auto PR: Update licenses" - body: ${{ steps.check_licenses.outputs.patch }} - branch: update-licenses-${{ github.run_number }} - base: [ "*-software.eessi.io" ] - - - name: Apply patch (if no PR created) - if: steps.create_pull_request.outputs.number == '' && steps.check_licenses.outputs.patch != '' - run: | - if [ -f license_update.patch ] && [ -s license_update.patch ]; then - git apply license_update.patch - else - echo "No changes to apply" - fi - git add licenses.json - git diff --cached --exit-code || git commit -m "Update licenses.json" - git push - env: - GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}