From e5238d396aedbac86a06321a1befcb131c837090 Mon Sep 17 00:00:00 2001 From: Bob Dolin Date: Thu, 22 Feb 2024 12:34:13 -0800 Subject: [PATCH] Update getMolecularConsequences.py --- genomics-apps/getMolecularConsequences.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/genomics-apps/getMolecularConsequences.py b/genomics-apps/getMolecularConsequences.py index e19ae023..b9057372 100644 --- a/genomics-apps/getMolecularConsequences.py +++ b/genomics-apps/getMolecularConsequences.py @@ -199,8 +199,8 @@ def findPathogenicities(variantList, subject, range): st.title("Get Molecular Consequences") -st.markdown("This app illustrates [FHIR Genomics Operations](http://build.fhir.org/ig/HL7/genomics-reporting/operations.html) find-subject-variants, find-subject-intersecting-variants, \ -and find-subject-haplotypes; and the get-feature-coordinates utility. Enter patient and gene in the sidebar and click 'run'. All overlapping simple variants, structural variants, \ +st.markdown("This app illustrates [FHIR Genomics Operations](http://build.fhir.org/ig/HL7/genomics-reporting/operations.html) **find-subject-variants**, **find-subject-intersecting-variants**, \ +and **find-subject-haplotypes**; and the **get-feature-coordinates** utility. Enter patient and gene in the sidebar and click 'run'. All overlapping simple variants, structural variants, \ and genotypes are returned. Check the compute additional annotations button to calculate annotations for variants that were previously unannotated, concatenate SNVs that are \ in cis into MNVs, and annotate those MNVs.")