Import Geant4 9.0.1 source tree

Author: gcosmo

ReleaseNotes/Patch4.8.3-1.txt

@@ -0,0 +1,74 @@
+
+                 Geant4 8.3 - patch-01 Release Notes
+                 -----------------------------------
+
+                                                           17 August 2007
+
+List of fixes included in this public patch since the public release 8.3:
+
+  o Configuration:
+    -------------
+    + liblist.c: fixed problem affecting recent CygWin installations on
+      Windows in parsing the buffer for the generation of libname.map.
+    + binmake.gmk: defined OUT internal variable specifying the proper
+      compilation/linking option to Unix or Windows compilers: '-o '
+      and '/Fe' respectively. Cleared <TAB> characters where not necessary.
+    + SUN-CC.gmk: forced -xO2 as optimisation level.
+
+  o Geometry:
+    --------
+    + magneticfield:
+      o Relaxed 'FatalException' to 'Warning' in method
+        G4MagIntegratorDriver::AccurateAdvance() for case of step zero and
+        return previous value. This fixes problem observed by ATLAS and CMS
+        in release 8.3 when using very conservative values for field
+        parameters.
+    + solids/specific:
+      o Fixes in G4Polyhedra::GetPointOnSurface():
+        Correctly treat 'totalPhi' instead of 'endPhi' for the case of open
+        shapes and 'twopi' for not open shapes.
+        Introduced fix for the case when number of sectors (numSide) is equal
+        to 1. At the origin of problems observed when checking overlaps for
+        polyhedra solids defined as such.
+
+  o Global:
+    ------
+    + Changed date for patch-01 to release 8.3.
+
+  o Materials:
+    ---------
+    + G4NistElementBuilder: added protection (Z>=limitNumElements) inside
+      method BuildElement().
+
+  o Hadronic Processes:
+    ------------------
+    + models/chiral_inv_phase_space:
+      o G4QuasiFreeRatios: fixed DB filling (ID update), responsible for
+        excessive growth of memory in long runs. Corrected indexing and
+        computation of cos(theta).
+    + util:
+      o Three bug fixes in G4ReactionDynamics::TwoCluster(): removed a sharp
+        peak at 180 degrees by fixing a units error and fixed an error in
+        sampling the momentum transfer. Fixed array bound violation which
+        caused in some rare occasions an infinite loop.
+
+  o Physics Lists:
+    -------------
+    + Correct use of QElasticPhysics in QGSP_QEL list.
+
+ ----------------------------------------------------------------------------
+
+                             Technical Notes
+                             --------------- 
+
+  o  This patch should be applied on top of release 8.3
+  o  Technical notes distributed for release 8.3 are also applicable and
+     valid for this patch.
+
+The code and rebuilt binary libraries for release 8.3 are available
+through our "Archive of Previous Releases" Web page:
+   http://cern.ch/geant4/support/source_archive.shtml
+
+Please refer to the Geant4 User Documentation:
+   http://cern.ch/geant4/support/userdocuments.shtml
+for further information about using Geant4.

ReleaseNotes/Patch4.9.0-1.txt

@@ -0,0 +1,190 @@
+
+                 Geant4 9.0 - patch-01 Release Notes
+                 -----------------------------------
+
+                                                           28 August 2007
+
+List of fixes included in this public patch since the public release 9.0:
+
+  o Configuration:  (*)
+    -------------
+    + liblist.c: fixed problem affecting recent CygWin installations on
+      Windows in parsing the buffer for the generation of libname.map.
+    + binmake.gmk: defined OUT internal variable specifying the proper
+      compilation/linking option to Unix or Windows compilers: '-o '
+      and '/Fe' respectively. Cleared <TAB> characters where not necessary.
+    + SUN-CC.gmk: forced -xO2 as optimisation level.
+
+  o Geometry:
+    --------
+    + magneticfield:
+      o Fix to DistChord() method for Helical Steppers: adopt 'special' case
+        also for Ang<2pi not only for Ang<pi; use cos() in place of tan(), to
+        improve CPU performance.
+      o In G4HelixMixedStepper added possibility to call different steppers
+        for small steps and add some statistics how offen different steppers
+        are called. Improved AdvanceHelix() to be able to make half step and
+        full step in one call.
+      o G4RKG3_Stepper: improved internal algorithm to use pre-computed values;
+        the stepper now gives comparable CPU performance as ClassicalRK4.
+      o Changed FatalException to EventMustBeAborted in AccurateAdvance()
+        if proposed integration step is negative.  (*)
+    + management:
+      o Added dummy constructor and destructor to G4VPVParameterisation.
+    + solids/BREPS:
+      o Added missing initialisations of kCarTolerance in alternative
+        constructors for G4BoundingBox3D, G4Curve, G4CurveRayIntersection,
+        G4KnotVector. Addressing problem report #959.
+    + solids/CSG:
+      o G4Tubs: fixed bug in DistanceToOut(p,v,..) for negative value under
+        sqrt() for the case of point p on the surface and v tangent to the
+        surface. Responsible for rare cases of NaN.
+    + solids/specific:
+      o Fixes in G4Polyhedra::GetPointOnSurface():  (*)
+        Correctly treat 'totalPhi' instead of 'endPhi' for the case of open
+        shapes and 'twopi' for not open shapes.
+        Introduced fix for the case when number of sectors (numSide) is equal
+        to 1. At the origin of problems observed when checking overlaps for
+        polyhedra solids defined as such.
+      o Fixed dummy constructors of G4Polycone and G4PolyPhiFace for
+        initialisation of 'edges' and 'corners'. Added workaround to
+        initialisation of 'corners' vector in G4PolyconeSide class, to allow
+        for object persistency with Root-I/O.
+      o G4EllipticalCone:
+        - DistanceToIn(p): corrected answer for p.z()<-zTopCut and for the
+          point p on the surface.
+        - DistanceToOut(p,v): now returning positive solution or zero when
+          crossing the elliptical surface.
+        - Fix in DistanceToOut(p) which was giving always zero.
+        - Added some formulas on how to pre-calculate 'SemiAxis' and 'zheight'.
+
+  o Global:
+    ------
+    + Changed date for patch-01 to release 9.0.
+
+  o Graphics Representations:
+    ------------------------
+    + Corrected graphical description for G4EllipticalCone in HepPolyhedron
+      and G4Polyhedron.
+    + G4VGraphicsScene: Added default constructor and virtual destructor.
+
+  o Intercoms:
+    ---------
+    + G4UIbatch:
+      o Bug fixed for the treatment of the last line.
+      o Added support for continued line by '\', '_'.
+      o String after '#' is treated as comment.
+      o White spaces at the head of a line are allowed.
+      o Fixed problem on 32bit-Linux.
+    + G4UImanager: fixed bug concerning invalid returned object.
+    + Introduced "/control/getEnv" and "/control/echo" commands.
+
+  o Electromagnetic Processes:
+    -------------------------
+    + Polarisation:
+      o Removed/renamed obsolete methods and local variables in
+        classes G4VPolarizedCrossSection, G4eplusPolarizedAnnihilation,
+        and G4PolarizedAnnihilationModel to clear "shadow" warnings on SUN-CC.
+    + Standard:
+      o G4UniversalFluctuation: added protection such that no sampling of
+        fluctuations is done if mean energy loss at the step is below minimal
+        excitation energy of the media. The fix is important for cases of
+        low-dense gases and very small steps.
+      o G4UniversalFluctuation: added protection for low-density materials
+        or very small steps - mean energy loss below minimal excitation
+        energy - no fluctuation sampling but mean energy loss.
+    + Utils:
+      o G4VEmModel: fixed SelectRandomAtom() method for the selection of
+        elements in a compound material.
+    + Xrays:
+      o G4VXTRenergyLoss: fixed Valgrind run-time errors for wrong memory
+        allocation by removing internal initialisation of Sandia table and
+        using Sandia table from materials.
+
+  o Hadronic Processes:
+    ------------------
+    + models/chiral_inv_phase_space:  (*)
+      o G4QuasiFreeRatios: fixed DB filling (ID update), responsible for
+        excessive growth of memory in long runs. Corrected indexing and
+        computation of cos(theta).
+    + models/neutron_hp:
+      o G4NeutronHPThermalScattering: removed duplicate declaration of
+        'dirName', already a class member, to clear compilation warning.
+    + models/util:
+      o G4KineticTrack: changed local variable names to clear compilation
+        warnings on SUN-CC about hiding.
+    + stopping:
+      o Fixed signature of G4MuMinusCaptureCascade::DoCascade() expecting
+        'const' as arguments for A and Z. Resolves linking problems on SUN-CC.
+
+  o Visualization:
+    -------------
+    + Removed redundant method declarations and minor tidies.
+
+  o Environments:
+    ------------
+    + Minor bug fixes to G4Py module; updated geometry wrappers and TestEm0
+      example.
+
+  o Examples:
+    --------
+    + advanced/medical_linac:
+      o Fixed problem report #880 in DetectorConstruction class.
+      o Updated macros; reviewed seed initialisation and modified to use
+        default multiple-scattering class instead of MultipleScattering52.
+    + advanced/microbeam:
+      o Improved dose calculation in the code in order to take into account
+        small energy deposits by any particle around the phantom edge voxels,
+        by suppressing a selection condition on the PostStep. The total result
+        of the dose calculation does not change significantly.
+      o Added protection against scattering at large angles in collimators.
+      o Suppressed field manager in zones with zero field.
+      o Use 'kUndefined' optimization in cell phantom implementation.
+      o Changed number of incident alpha particles in microbeam.mac.
+    + advanced/underground_physics:
+      o Added missing header file G4hIonisation.hh to DMXPhysicsLists
+        translation unit.
+      o Added G4StepLimiter to physics list as correction of migration
+        required since Geant4 release 7.0.
+    + extended/electromagnetic/TestEm7:
+      o Updated README for physics-list names.
+    + extended/electromagnetic/TestEm8:
+      o Fixed PAI physics constructors: energy loss processes should be
+        active post step.
+      o Create VisManager only for interactive session, improved destructor
+        of Em8DetectorConstruction class.
+    + extended/electromagnetic/TestEm10:
+      o Create VisManager only for interactive session, improved destructor
+        of Em10DetectorConstruction class.
+    + extended/electromagnetic/TestEm13:
+    + extended/electromagnetic/TestEm14:
+      o SteppingAction : modify logic to take into account low energy packages.
+    + extended/medical/fanoCavity:
+      o Use 'fUseDistanceToBoundary' in physics-list for 'emOptions'. Cleanup.
+    + extended/medical/GammaTherapy:
+      o Provide possibility to change cuts between runs.
+    + extended/radioactivedecay/exrdm:
+      o Removed obsolete hadronic builders and use only QGSP_BIC,
+        QGSP_BIC_HP, QGSP_BERT, QGSP_BERT_HP instead.
+    + novice/N02:
+      o Fixed implementation of ExN02MagneticField class in way field is set.
+
+
+ (*) Fixes also included in the patched release 8.3.p01.
+
+ ----------------------------------------------------------------------------
+
+                             Technical Notes
+                             --------------- 
+
+  o  This patch should be applied on top of release 9.0
+  o  Technical notes distributed for release 9.0 are also applicable and
+     valid for this patch.
+
+The code and rebuilt binary libraries for release 9.0 are available
+through our "Download" Web page:
+   http://cern.ch/geant4/support/download.shtml
+
+Please refer to the Geant4 User Documentation:
+   http://cern.ch/geant4/support/userdocuments.shtml
+for further information about using Geant4.

config/History

@@ -1,4 +1,4 @@
-$Id: History,v 1.295 2007/06/28 17:01:13 gcosmo Exp $
+$Id: History,v 1.300.2.1 2007/08/20 09:41:20 gcosmo Exp $
 -------------------------------------------------------------------
 
      =========================================================
@@ -16,6 +16,20 @@ committal in the CVS repository !
      * Reverse chronological order (last date on top), please *
      ----------------------------------------------------------
 
+16th August 2007  Gabriele Cosmo (config-V09-00-04a)
+- Corrected definition of OUT internal variable to allow for proper
+  linking also of unit tests.
+
+13th August 2007  Gabriele Cosmo (config-V09-00-02)
+- SUN-CC.gmk: forced -xO2 as optimisation level.
+
+18th July 2007  Gabriele Cosmo (config-V09-00-01)
+- liblist.c: fixed problem affecting recent CygWin installations on
+  Windows in parsing the buffer for the generation of libname.map.
+- binmake.gmk: defined OUT internal variable specifying the proper
+  compilation/linking option to Unix or Windows compilers: '-o '
+  and '/Fe' respectively.
+
 28th June 2007  Gabriele Cosmo (config-V08-03-04)
 - Updated Configure scripts to fix installation issue when installation
   path is different from source path and headers are not installed.

config/binmake.gmk

@@ -1,4 +1,4 @@
-# $Id: binmake.gmk,v 1.123 2007/06/28 14:16:55 gcosmo Exp $
+# $Id: binmake.gmk,v 1.129.2.1 2007/08/20 09:41:21 gcosmo Exp $
 # ----------------------------------------------------------
 # Script defining rules and paths for making binaries.
 #    First implementation: Gabriele Cosmo, 25/06/1998.
@@ -282,6 +282,7 @@ LDLIBS_PREFINAL += $(LDLIBS4)
 LDLIBS_KERNEL   += $(LDLIBS4)
 
 ifneq (,$(findstring WIN32-VC,$(G4SYSTEM)))
+  # Windows
   WIN32TMP := $(patsubst -L%,$(LIB_PATH)%,$(LDFLAGS))
   LDFLAGS  = $(patsubst /,$(PATH_DEL),$(WIN32TMP))
   WIN32TMP2 := $(patsubst -L%,$(LIB_PATH)%,$(LDLIBS_PREFINAL))
@@ -296,8 +297,11 @@ ifneq (,$(findstring WIN32-VC,$(G4SYSTEM)))
   else
     LDLIBS = $(TARGETLIB) $(patsubst -l%,lib%.a,$(WIN32TMP2))
   endif
+  OUT   := /Fe
 else
+  # Unix
   LDLIBS = $(TARGETLIB) $(LDLIBS_PREFINAL)
+  OUT   := -o 
 endif
 
 ifdef transform-RPath
@@ -339,12 +343,12 @@ endif
 	@if [ ! -d $(G4BINDIR) ] ; then mkdir $(G4BINDIR) ;fi
 ifdef CPPVERBOSE
 	$(CXX) $(CXXFLAGS) $(CPPFLAGS) \
-	  -o $(G4BINDIR)/$(G4TARGET) $(objects) $(LDFLAGS) \
+	  $(OUT)$(G4BINDIR)/$(G4TARGET) $(objects) $(LDFLAGS) \
 	  $(LDLIBS)
 else
 	@echo Linking $(G4TARGET) ...
 	@$(CXX) $(CXXFLAGS) $(CPPFLAGS) \
-	  -o $(G4BINDIR)/$(G4TARGET) $(objects) $(LDFLAGS) \
+	  $(OUT)$(G4BINDIR)/$(G4TARGET) $(objects) $(LDFLAGS) \
 	  $(LDLIBS)
 	@if [ \( -f $(G4BINDIR)/$(G4TARGET) \) ]; then \
 	  echo "... Done!"; fi

config/liblist.c

@@ -1,4 +1,4 @@
-/* $Id: liblist.c,v 1.18 2006/10/05 14:22:06 gcosmo Exp $ */
+/* $Id: liblist.c,v 1.19 2007/07/18 14:21:15 gcosmo Exp $ */
 
 /*
 Given a "libname.map" file on standard input and a list or directory
@@ -303,7 +303,6 @@ int main (int argc, char** argv) {
 
 #if defined ( _WIN32 ) || defined ( __CYGWIN__ ) || defined ( __CYGWIN32__ )
       ptr=strchr(ntg4tmp1,':');
-      if ( ptr ) *(ptr+1)='\0';
 
       while ( ptr=strchr(buffer,'\\') ) *ptr='/';
 

config/sys/SUN-CC.gmk

@@ -4,7 +4,7 @@
 ifeq ($(G4SYSTEM),SUN-CC)
   CXX       := CC
   ifdef G4OPTIMISE
-    CXXFLAGS  := -O
+    CXXFLAGS  := -xO2
   else
     ifdef G4DEBUG
       CXXFLAGS  := -g

environments/History

@@ -1,4 +1,4 @@
-$Id: History,v 1.29 2007/06/07 09:12:11 kmura Exp $
+$Id: History,v 1.30 2007/07/13 05:13:22 kmura Exp $
 -------------------------------------------------------------------
 
      =========================================================
@@ -18,6 +18,12 @@ committal in the CVS repository !
      * Reverse chronological order (last date on top), please *
      ----------------------------------------------------------
 
+envs-V09-00-00  14 July Koichi Murakami
+ [g4py]
+  - bug fix
+  - update/add geometry staffs
+  - new example of TestEm0
+
 envs-V08-03-01  7 June Koichi Murakami
  [g4py]
   - modified for 9.0 (checked for cand-05)