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Remove sonar cloud references #320

Remove sonar cloud references

Remove sonar cloud references #320

Triggered via push March 14, 2026 23:19
Status Failure
Total duration 5m 53s
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build.yml

on: push
Matrix: build
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1 error and 46 warnings
Pack and Push NuGet Package
Process completed with exit code 1.
Build and Test on macos-latest
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/checkout@v4, actions/setup-dotnet@v4. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
Build and Test on macos-latest: CLI.Tests/CLIOptions.cs#L79
Possible mistaken empty statement
Build and Test on macos-latest: CLI.Tests/CLIOptions.cs#L67
Possible mistaken empty statement
Build and Test on macos-latest: CLI.Tests/TmpMspc.cs#L181
The variable 'output' is declared but never used
Build and Test on macos-latest: CLI.Tests/TmpMspc.cs#L156
The annotation for nullable reference types should only be used in code within a '#nullable' annotations context.
Build and Test on macos-latest: Core.Tests/Basic/TPeak.cs#L178
Change one instance of 'x' to a different value; comparing 'x' to itself always returns true. (https://rules.sonarsource.com/csharp/RSPEC-1764)
Build and Test on macos-latest: CLI/Export/Exporter.cs#L151
'Dispose' of 'writter'. (https://rules.sonarsource.com/csharp/RSPEC-2930)
Build and Test on macos-latest: CLI/Export/Exporter.cs#L85
'Dispose' of 'writter'. (https://rules.sonarsource.com/csharp/RSPEC-2930)
Build and Test on macos-latest: Core/Functions/ConsensusPeaks.cs#L64
Remove this unused 'fdr' local variable. (https://rules.sonarsource.com/csharp/RSPEC-1481)
Build and Test on macos-latest: Core/Functions/FalseDiscoveryRate.cs#L11
Add a 'protected' constructor or the 'static' keyword to the class declaration. (https://rules.sonarsource.com/csharp/RSPEC-1118)
Build and Test on macos-latest: Core/IntervalTree/NodeData.cs#L6
When implementing IComparable<T>, you should also override Equals, <, >, <=, >=, ==, !=. (https://rules.sonarsource.com/csharp/RSPEC-1210)
Build and Test on ubuntu-latest
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/checkout@v4, actions/setup-dotnet@v4. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
Build and Test on ubuntu-latest: CLI.Tests/CLIOptions.cs#L79
Possible mistaken empty statement
Build and Test on ubuntu-latest: CLI.Tests/CLIOptions.cs#L67
Possible mistaken empty statement
Build and Test on ubuntu-latest: CLI.Tests/TmpMspc.cs#L181
The variable 'output' is declared but never used
Build and Test on ubuntu-latest: CLI.Tests/TmpMspc.cs#L156
The annotation for nullable reference types should only be used in code within a '#nullable' annotations context.
Build and Test on ubuntu-latest: Core.Tests/Basic/TPeak.cs#L178
Change one instance of 'x' to a different value; comparing 'x' to itself always returns true. (https://rules.sonarsource.com/csharp/RSPEC-1764)
Build and Test on ubuntu-latest: CLI/Export/Exporter.cs#L151
'Dispose' of 'writter'. (https://rules.sonarsource.com/csharp/RSPEC-2930)
Build and Test on ubuntu-latest: CLI/Export/Exporter.cs#L85
'Dispose' of 'writter'. (https://rules.sonarsource.com/csharp/RSPEC-2930)
Build and Test on ubuntu-latest: Core/Functions/ConsensusPeaks.cs#L64
Remove this unused 'fdr' local variable. (https://rules.sonarsource.com/csharp/RSPEC-1481)
Build and Test on ubuntu-latest: Core/IntervalTree/NodeData.cs#L6
When implementing IComparable<T>, you should also override Equals, <, >, <=, >=, ==, !=. (https://rules.sonarsource.com/csharp/RSPEC-1210)
Build and Test on ubuntu-latest: Core/Functions/FalseDiscoveryRate.cs#L11
Add a 'protected' constructor or the 'static' keyword to the class declaration. (https://rules.sonarsource.com/csharp/RSPEC-1118)
Build and Test on windows-latest
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/checkout@v4, actions/setup-dotnet@v4. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
Build and Test on windows-latest: CLI.Tests/CLIOptions.cs#L79
Possible mistaken empty statement
Build and Test on windows-latest: CLI.Tests/CLIOptions.cs#L67
Possible mistaken empty statement
Build and Test on windows-latest: CLI.Tests/TmpMspc.cs#L181
The variable 'output' is declared but never used
Build and Test on windows-latest: CLI.Tests/TmpMspc.cs#L156
The annotation for nullable reference types should only be used in code within a '#nullable' annotations context.
Build and Test on windows-latest: CLI/Export/Exporter.cs#L151
'Dispose' of 'writter'. (https://rules.sonarsource.com/csharp/RSPEC-2930)
Build and Test on windows-latest: CLI/Export/Exporter.cs#L85
'Dispose' of 'writter'. (https://rules.sonarsource.com/csharp/RSPEC-2930)
Build and Test on windows-latest: Core.Tests/Basic/TPeak.cs#L178
Change one instance of 'x' to a different value; comparing 'x' to itself always returns true. (https://rules.sonarsource.com/csharp/RSPEC-1764)
Build and Test on windows-latest: Core/Functions/ConsensusPeaks.cs#L64
Remove this unused 'fdr' local variable. (https://rules.sonarsource.com/csharp/RSPEC-1481)
Build and Test on windows-latest: Core/IntervalTree/NodeData.cs#L6
When implementing IComparable<T>, you should also override Equals, <, >, <=, >=, ==, !=. (https://rules.sonarsource.com/csharp/RSPEC-1210)
Build and Test on windows-latest: Core/Functions/FalseDiscoveryRate.cs#L11
Add a 'protected' constructor or the 'static' keyword to the class declaration. (https://rules.sonarsource.com/csharp/RSPEC-1118)
Pack and Push NuGet Package
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/checkout@v4, actions/setup-dotnet@v4. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
Pack and Push NuGet Package
A stable release of a package should not have a prerelease dependency. Either modify the version spec of dependency "System.CommandLine
Pack and Push NuGet Package
A stable release of a package should not have a prerelease dependency. Either modify the version spec of dependency "System.CommandLine
Pack and Push NuGet Package: CLI.Tests/CLIOptions.cs#L91
Possible mistaken empty statement
Pack and Push NuGet Package: CLI.Tests/CLIOptions.cs#L79
Possible mistaken empty statement
Pack and Push NuGet Package: CLI.Tests/CLIOptions.cs#L67
Possible mistaken empty statement
Pack and Push NuGet Package: CLI.Tests/TmpMspc.cs#L156
The annotation for nullable reference types should only be used in code within a '#nullable' annotations context.
Pack and Push NuGet Package: Core.Tests/Basic/TPeak.cs#L178
Change one instance of 'x' to a different value; comparing 'x' to itself always returns true. (https://rules.sonarsource.com/csharp/RSPEC-1764)
Pack and Push NuGet Package: CLI/Export/Exporter.cs#L151
'Dispose' of 'writter'. (https://rules.sonarsource.com/csharp/RSPEC-2930)
Pack and Push NuGet Package: CLI/Export/Exporter.cs#L85
'Dispose' of 'writter'. (https://rules.sonarsource.com/csharp/RSPEC-2930)
Pack and Push NuGet Package: Core/Functions/ConsensusPeaks.cs#L64
Remove this unused 'fdr' local variable. (https://rules.sonarsource.com/csharp/RSPEC-1481)
Pack and Push NuGet Package: Core/IntervalTree/NodeData.cs#L6
When implementing IComparable<T>, you should also override Equals, <, >, <=, >=, ==, !=. (https://rules.sonarsource.com/csharp/RSPEC-1210)
Pack and Push NuGet Package: Core/Functions/FalseDiscoveryRate.cs#L11
Add a 'protected' constructor or the 'static' keyword to the class declaration. (https://rules.sonarsource.com/csharp/RSPEC-1118)