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1 parent b48930a commit bb84c0bCopy full SHA for bb84c0b
graphgen/models/searcher/db/ncbi_searcher.py
@@ -7,7 +7,6 @@
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from functools import lru_cache
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from http.client import IncompleteRead
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from typing import Dict, Optional
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-from graphgen.models.searcher.limitter import RateLimiter
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from Bio import Entrez, SeqIO
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from Bio.Blast import NCBIWWW, NCBIXML
@@ -67,7 +66,6 @@ def __init__(
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if self.use_local_blast and not os.path.isfile(f"{self.local_blast_db}.nhr"):
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logger.error("Local BLAST database files not found. Please check the path.")
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self.use_local_blast = False
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- self.rate_limiter = RateLimiter()
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@staticmethod
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def _nested_get(data: dict, *keys, default=None):
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