DESCRIPTION

Type: Package
Package: singscoreHCA
Title: test transcriptomic signatures on the Human Cell Atlas
Version: 0.1.1
Authors@R: c(person("Stefano", "Mangiola", email = "mangiolastefano@gmail.com",
                  role = c("aut", "cre"))
                  )
Description: An R package to score signatures on the HumanCellAtlas, single-cell or pseudobulk (e.g. GSEA,singscore).
License: GPL-3
Depends:
    R (>= 4.1.0)
Imports:
    singscore,
    tibble,
    dplyr,
    magrittr,
    tidyr (>= 1.2.0),
    rlang,
    purrr,
    lifecycle,
    methods,
    tidySummarizedExperiment,
    CuratedAtlasQueryR
Suggests:
    testthat,
    knitr,
    markdown
VignetteBuilder: 
    knitr
RdMacros:
    lifecycle
Biarch: true
biocViews: AssayDomain, Infrastructure, RNASeq, DifferentialExpression, GeneExpression, Sequencing, Transcription, Transcriptomics
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.3.2
URL: https://github.com/stemangiola/singscoreHCA, https://stemangiola.github.io/singscoreHCA/
BugReports: https://github.com/stemangiola/singscoreHCA/issues