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output gzipped data #26
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Actually I implemented this feature but finally discarded it since the python gzip lib is too slow for direct gz output. Currently I suggest to add a gzip after AfterQC is done. I am considering to reimplement AfterQC with C++ for some performance and threading issue. |
Some tools have --gzip parameter to allow users decide whether to gzip output or not |
gzip output has been enabled on master branch. For gzipped input, then the output will be also gzipped.
Use |
If the input is gzipped data, the output should be automatically gzipped. Otherwise users would encounter large files
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