Boxplot of cell-level expression by gene and contrast #1333
Labels
gui
Issues or pull requests involving the Web UI
single cell
Issues related to single-cell data support
Milestone
When rendering DE results for single cell data, it should be possible to render a boxplot for each sample grouped by condition for a given gene.
This would be informative in many ways as a user could assess how many cells each sample contributes, the expression level of those cells, the variability, presence of outliers, etc.
When getting results by gene, we can pool all the design elements.
This would be in the EE QC controller with the following parameters:
I think we will have to modify the sorting code to group sub-assays by their source assay or else the cell type factor would be used and result in a grouping by subset.
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