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Determine window size #40

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Sum02dean opened this issue Mar 24, 2022 · 0 comments
Open

Determine window size #40

Sum02dean opened this issue Mar 24, 2022 · 0 comments

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@Sum02dean
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Sum02dean commented Mar 24, 2022

For each sequence, count the average number of nucleotides from start position to TSS (start).

The window size should not contain too many Ns (padding values). Identity the average distance from position_1 - TSS(end).

The window should be symmetrically sized around the +++TSS-start and TSS-end+++

Expecto used 20kbp either side.

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