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DESCRIPTION
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DESCRIPTION
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Package: tcplfit2
Title: A Concentration-Response Modeling Utility
Version: 0.1.7
Authors@R: c(person("Thomas", "Sheffield", role = c("aut")),
person("Richard S", "Judson", role = c("ctb"), comment = c(ORCID = "0000-0002-2348-9633")),
person("Jason", "Brown", role = "cre", email = "[email protected]", comment = c(ORCID = "0009-0000-2294-641X")),
person("Sarah E.","Davidson",role=c("ctb"),email="[email protected]", comment = c(ORCID = "0000-0002-2891-9380")),
person("Zhihui","Zhao",role=c("ctb")),
person("Madison","Feshuk",role = "ctb",email = "[email protected]", comment = c(ORCID = "0000-0002-1390-6405")),
person("Katie", "Paul Friedman", role=c("ctb"), email = "[email protected]", comment = c(ORCID = "0000-0002-2710-1691"))
)
Description: The tcplfit2 R package performs basic concentration-response curve fitting. The original tcplFit() function in the tcpl R package performed basic concentration-response curvefitting to 3 models. With tcplfit2, the core tcpl concentration-response functionality has been expanded to process diverse high-throughput screen (HTS) data generated at the US Environmental Protection Agency, including targeted ToxCast, high-throughput transcriptomics (HTTr) and high-throughput phenotypic profiling (HTPP). tcplfit2 can be used independently to support analysis for diverse chemical screening efforts.
URL: https://github.com/USEPA/CompTox-ToxCast-tcplFit2
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.3.1
Suggests:
knitr,
rmarkdown,
stringi,
DT,
data.table,
tcpl,
prettydoc,
testthat (>= 3.0.0),
here,
htmlTable,
tidyr,
dplyr,
gridExtra,
rmdformats
VignetteBuilder: knitr
Imports:
stats,
methods,
numDeriv,
RColorBrewer,
stringr,
reshape2,
ggplot2
Depends:
R (>= 3.5.0)
Config/testthat/edition: 3
BugReports: https://github.com/USEPA/CompTox-ToxCast-tcplFit2/issues