From db81cd64806bba5adcef536aadf6ee3efb1bec0c Mon Sep 17 00:00:00 2001 From: Paul Wilkinson Date: Tue, 12 Mar 2024 08:11:33 -0400 Subject: [PATCH] edited SQL to output GenomeDoubleStrand and AnnotatedProteins fasta files into fasta dir --- Model/lib/wdk/model/questions/params/similarityParams.xml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/Model/lib/wdk/model/questions/params/similarityParams.xml b/Model/lib/wdk/model/questions/params/similarityParams.xml index be1ab2170a..1df93b9631 100644 --- a/Model/lib/wdk/model/questions/params/similarityParams.xml +++ b/Model/lib/wdk/model/questions/params/similarityParams.xml @@ -148,7 +148,7 @@ order by parentterm,term case when ot.organism is null then files.parentterm else ot.parentterm end as parentterm, case when (ot.organism is null or ( ot.organism is not null and ot.term = files.term)) - then '@WEBSERVICEMIRROR@' || '/' || ot.project_id || '/build-%%buildNumber%%/' || files.abbreviation || '/motif/GenomeDoubleStrand.fasta' + then '@WEBSERVICEMIRROR@' || '/' || ot.project_id || '/build-%%buildNumber%%/' || files.abbreviation || '/fasta/GenomeDoubleStrand.fasta' else '-1' end as internal from apidbtuning.organismtree ot, @@ -201,7 +201,7 @@ with orgs as ( select distinct nvl(ot.term, files.term) as term, case when ot.organism is null then files.parentterm else ot.parentterm end as parentterm, case when (ot.organism is null or ( ot.organism is not null and ot.term = files.term)) - then '@WEBSERVICEMIRROR@' || '/' || files.project_id || '/build-%%buildNumber%%/' || files.abbreviation || '/motif/AnnotatedProteins.fasta' + then '@WEBSERVICEMIRROR@' || '/' || files.project_id || '/build-%%buildNumber%%/' || files.abbreviation || '/fasta/AnnotatedProteins.fasta' else '-1' end as internal from apidbtuning.organismtree ot,