diff --git a/README.txt b/README.txt index db4239b..5d25e7c 100644 --- a/README.txt +++ b/README.txt @@ -5,13 +5,14 @@ WARNING: scitools is still in a development stage - a number of commands are in active development. SETUP: To set up scitools, download the repository to the -location you want the executable to be. Keep all index files -and folders within the scitools directory. We recommend adding -the scitools execulable to your path. We also recommend editing the -scitools.cfg file to add in command-line callable executables used -by scitools, defaults assume they are all in your path. Once it is -set up, run 'scitools dependencies' which will check for external -software that scitools relies on. +location you want the executable to be. Then change the +permission of `scitools` using `chmod 755 scitools` command. +Keep all index files and folders within the scitools directory. +We recommend adding the scitools execulable to your path. We +also recommend editing the scitools.cfg file to add in command-line +callable executables used by scitools, defaults assume they are all +in your path. Once it is set up, run 'scitools dependencies' which +will check for external software that scitools relies on. DESCRIPTION: scitools is a set of scripts designed for working with single-cell combinatorial indexing data. It includes tools to go from