From 533de89beabcd485cd4c6572cbf764370ff3858d Mon Sep 17 00:00:00 2001 From: Ben Dichter Date: Tue, 9 Jun 2026 08:58:59 -0400 Subject: [PATCH] Add Uchida Lab NWB conversion entry Add SFARI ARC Spyglass conversion for the Uchida lab (Harvard), covering Doric fiber photometry, multi-camera behavioral video, DANNCE/social-DANNCE pose estimation, pCampi TTL synchronization, trial event data, and Neuropixels ephys (stretch goal), with Spyglass-compatible output. Co-Authored-By: Claude Opus 4.8 (1M context) --- src/content/nwb-conversions/harvard-uchida-lab.md | 10 ++++++++++ 1 file changed, 10 insertions(+) create mode 100644 src/content/nwb-conversions/harvard-uchida-lab.md diff --git a/src/content/nwb-conversions/harvard-uchida-lab.md b/src/content/nwb-conversions/harvard-uchida-lab.md new file mode 100644 index 0000000..3af4879 --- /dev/null +++ b/src/content/nwb-conversions/harvard-uchida-lab.md @@ -0,0 +1,10 @@ +--- +lab: "Naoshige Uchida" +institution: "Harvard University" +description: "Developing NWB conversion tools for the Uchida lab's behavioral and fiber photometry datasets studying social behavior and observational fear learning. The conversion pipeline handles fiber photometry from Doric hardware (raw and processed MATLAB signals), multi-camera behavioral video (six cameras), DANNCE / social-DANNCE pose estimation, pCampi synchronization data (H5 files with TTL pulses), stimulus and trial event data (e.g., foot shock times), and subject metadata, with Neuropixels electrophysiology (SpikeGLX) including spike-sorted output and trial structure as a stretch goal. The pipeline performs time alignment across data streams and adapts conversions for ingestion into a Spyglass analysis pipeline." +tags: ["fiber photometry", "behavioral tracking", "pose estimation", "video", "electrophysiology"] +github: "https://github.com/catalystneuro/uchida-lab-to-nwb" +date: "2026-04" +funded_project: "SFARI ARC Spyglass" +species: Rat +---