You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
The arguments to SphereTransform are called relative_center_{xyz}, but the call to ReslicePolar.reslice is performing translation in pixel units, without any normalization:
For completeness: when running the plugin via clij{2,x}-assistant, the arguments are indeed relative. Normalization of the relative coordinates is currently happening in two places, before calling the underlying CLIJ2 plugin with absolute coordinates:
The arguments to
SphereTransform
are calledrelative_center_{xyz}
, but the call toReslicePolar.reslice
is performing translation in pixel units, without any normalization:clij2/src/main/java/net/haesleinhuepf/clij2/plugins/SphereTransform.java
Lines 54 to 59 in 5c716fb
clij2/src/main/java/net/haesleinhuepf/clij2/plugins/ReslicePolar.java
Lines 75 to 76 in 5c716fb
I'd suggest to either rename the arguments to
center_{xyz}
, or to (re-)introduce some normalization to image dimensions before that call.The text was updated successfully, but these errors were encountered: