tools.yml

install_repository_dependencies: true
install_resolver_dependencies: true
install_tool_dependencies: true
tools:
  - name: data_manager_primer_scheme_bedfiles
    owner: iuc
    revisions:
      - 157a5c9ea72a
    tool_panel_section_label: COMBAT-SARS-COV-2::ARTIC-MINION
    tool_shed_url: toolshed.g2.bx.psu.edu
  - name: ivar_variants
    owner: iuc
    revisions:
      - 3888bbe7a9ca
    tool_panel_section_label: Tools from workflows
    tool_shed_url: https://toolshed.g2.bx.psu.edu/
  - name: multiqc
    owner: iuc
    revisions:
      - 75c93c70d094
    tool_panel_section_label: Tools from workflows
    tool_shed_url: https://toolshed.g2.bx.psu.edu/
  - name: bwa
    owner: devteam
    revisions:
      - 64f11cf59c6e
    tool_panel_section_label: Tools from workflows
    tool_shed_url: https://toolshed.g2.bx.psu.edu/
  - name: qualimap_bamqc
    owner: iuc
    revisions:
      - e7fd6754d093
    tool_panel_section_label: Tools from workflows
    tool_shed_url: https://toolshed.g2.bx.psu.edu/
  - name: pangolin
    owner: iuc
    revisions:
      - debfccc4d65b
    tool_panel_section_label: Tools from workflows
    tool_shed_url: https://toolshed.g2.bx.psu.edu/
  - name: nextclade
    owner: iuc
    revisions:
      - b74b9a7b3e3b
    tool_panel_section_label: Tools from workflows
    tool_shed_url: https://toolshed.g2.bx.psu.edu/
  - name: ivar_trim
    owner: iuc
    revisions:
      - c092052ed673
    tool_panel_section_label: Tools from workflows
    tool_shed_url: https://toolshed.g2.bx.psu.edu/
  - name: picard
    owner: devteam
    revisions:
      - 7d34178f2812
    tool_panel_section_label: Tools from workflows
    tool_shed_url: https://toolshed.g2.bx.psu.edu/
  - name: qc
    owner: sanbi-uwc
    revisions:
      - 6bdec8c62aec
    tool_panel_section_label: Tools from workflows
    tool_shed_url: https://testtoolshed.g2.bx.psu.edu/
  - name: text_processing
    owner: bgruening
    revisions:
      - 9ff72e942410
    tool_panel_section_label: Tools from workflows
    tool_shed_url: https://toolshed.g2.bx.psu.edu/
  - name: samtools_view
    owner: iuc
    revisions:
      - b72793637686
    tool_panel_section_label: Tools from workflows
    tool_shed_url: https://toolshed.g2.bx.psu.edu/
  - name: fastp
    owner: iuc
    revisions:
      - dbf9c561ef29
    tool_panel_section_label: Tools from workflows
    tool_shed_url: https://toolshed.g2.bx.psu.edu/
  - name: ivar_consensus
    owner: iuc
    revisions:
      - 731182d54f78
    tool_panel_section_label: Tools from workflows
    tool_shed_url: https://toolshed.g2.bx.psu.edu/