setup.py

#!/usr/bin/env python

from setuptools import setup

setup(
    name='isatools',
    version='0.11.0',
    packages=['isatools',
              'isatools.convert',
              'isatools.create',
              'isatools.errors',
              'isatools.io',
              'isatools.net',
              'isatools.tests'
              ],
    package_data={'isatools': [
        'resources/schemas/cedar/*.json',
        'resources/schemas/isa_model_version_1_0_schemas/core/*.json',
        'resources/schemas/configs/*.json',
        'resources/schemas/configs/schemas/*.json',
        'resources/config/json/default/*.json',
        'resources/config/json/default/schemas/*.json',
        'resources/config/json/sra/*.json',
        'resources/config/json/sra/schemas/*.json',
        'resources/config/xml/*.xml',
        'resources/sra_schemas/*.xsd',
        'resources/sra_templates/*.xml',
        'resources/tab_templates/*.txt',
        'net/resources/biocrates/*',
        'net/resources/sra/*.xsl',
        'net/resources/sra/*.xml',
        'resources/isatools.ini'],
        '': ['LICENSE.txt', 'README.md']},
    description='Metadata tracking tools help to manage an increasingly diverse set of life science, environmental and biomedical experiments',
    author='ISA Infrastructure Team',
    author_email='isatools@googlegroups.com',
    url='https://github.com/ISA-tools/isa-api',
    classifiers=[
        'Development Status :: 3 - Alpha',
        'Intended Audience :: Science/Research',
        'Intended Audience :: Developers',
        'Intended Audience :: System Administrators',
        'Topic :: Scientific/Engineering :: Bio-Informatics',
        'Programming Language :: Python :: 3.6',
        'Programming Language :: Python :: 3.7',
        'Programming Language :: Python :: 3.8',
        ],
    install_requires=[
        'numpy>=1.17',
        'jsonschema>=3.1',
        'pandas>=0.25',
        'networkx>=2.4',
        'lxml>=4.4',
        'requests>=2.22',
        'chardet>=3.0.4',
        'iso8601>=0.1.12',
        'jinja2>=2.10.3',
        'beautifulsoup4>=4.8',
        'mzml2isa>=1.0.2',
        'biopython>=1.74',
        'progressbar2>=3.47.0',
        'deepdiff>=4.0.8',
        'PyYAML>=5.2'
    ],
    test_suite='tests'
)