warp/sip.settings at master · dtegunov/warp · GitHub

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<?xml version="1.0" encoding="utf-16"?>
<Settings>
	<Param Name="InputFolder" Value="E:\sevil\" />
	<Param Name="InputExtension" Value="*.tif" />
	<Param Name="InputDatWidth" Value="7676" />
	<Param Name="InputDatHeight" Value="7420" />
	<Param Name="InputDatType" Value="int8" />
	<Param Name="InputDatOffset" Value="0" />
	<Param Name="OutputFolder" Value="" />
	<Param Name="OutputExtension" Value="*.mrc" />
	<Param Name="ArchiveOperation" Value="Compress" />
	<Param Name="ArchiveFolder" Value="" />
	<Param Name="ExpectTiltSeries" Value="False" />
	<Param Name="GainPath" Value="F:\rado27\20S_defocused_dataset_part1\gain.mrc" />
	<Param Name="CorrectGain" Value="False" />
	<Param Name="CorrectBlackRectangles" Value="True" />
	<Param Name="DataStarPath" Value="E:\rado22\RefinePolish\run1_it009_data.star" />
	<Param Name="ModelStarPath" Value="E:\rado22\RefinePolish\run1_it009_half1_model.star" />
	<Param Name="ReferencePath" Value="E:\rado22\RefinePolish20\run7_ct12_half1_class001_unfil_masked.mrc" />
	<Param Name="MaskPath" Value="E:\rado22\RefinePolish20\run7_postprocess_automask.mrc" />
	<Param Name="ProjectionOversample" Value="2" />
	<Param Name="ExportParticleSize" Value="320" />
	<Param Name="ExportParticleRadius" Value="95" />
	<Param Name="ProcessCTF" Value="True" />
	<Param Name="CTFWindow" Value="1024" />
	<Param Name="CTFRangeMin" Value="0.08" />
	<Param Name="CTFRangeMax" Value="0.70" />
	<Param Name="CTFMinQuality" Value="0.50" />
	<Param Name="CTFVoltage" Value="300" />
	<Param Name="CTFCs" Value="2.70" />
	<Param Name="CTFAmplitude" Value="0.07" />
	<Param Name="CTFPixelMin" Value="1.35" />
	<Param Name="CTFPixelMax" Value="1.35" />
	<Param Name="CTFPixelAngle" Value="66.0" />
	<Param Name="CTFDetectorPixel" Value="5" />
	<Param Name="CTFDoPhase" Value="False" />
	<Param Name="CTFAstigmatism" Value="0.007" />
	<Param Name="CTFAstigmatismAngle" Value="125.0" />
	<Param Name="CTFZMin" Value="0.3" />
	<Param Name="CTFZMax" Value="6.0" />
	<Param Name="ProcessParticleCTF" Value="False" />
	<Param Name="ProcessMovement" Value="True" />
	<Param Name="MovementRangeMin" Value="0.022" />
	<Param Name="MovementRangeMax" Value="0.15" />
	<Param Name="MovementBfactor" Value="0" />
	<Param Name="ProcessParticleShift" Value="False" />
	<Param Name="GridCTFX" Value="3" />
	<Param Name="GridCTFY" Value="3" />
	<Param Name="GridCTFZ" Value="2" />
	<Param Name="GridMoveX" Value="1" />
	<Param Name="GridMoveY" Value="1" />
	<Param Name="GridMoveZ" Value="10" />
	<Param Name="PostBinTimes" Value="1.00" />
	<Param Name="PostAverage" Value="True" />
	<Param Name="PostStack" Value="False" />
	<Param Name="PostStackGroupSize" Value="1" />
</Settings>