diff --git a/IQSS-slurm-examples/basicbatch.slurm b/IQSS-slurm-examples/basicbatch.slurm index ee1631a..49f273f 100644 --- a/IQSS-slurm-examples/basicbatch.slurm +++ b/IQSS-slurm-examples/basicbatch.slurm @@ -4,7 +4,7 @@ #SBATCH -t 15 # Runtime in minutes; job killed after this amount of time; default: 10 #SBATCH -p serial_requeue # Partition to submit to; default: serial_requeue #SBATCH --mem=100 # Memory shared across all cores in MB (see also –mem-per-cpu) -#SBATCH --open-mode=append; default: overwrite +#SBATCH --open-mode=append # default: overwrite #SBATCH -o %x_%j.out # Standard out goes to this file; default: slurm-JOBID.out #SBATCH -e %x_%j.err # Standard err goes to this file; default: slurm-JOBID.err @@ -12,7 +12,7 @@ # Commands to run go on next lines # Start by loading module(s) for your application: -load # put my application module(s) here +module load # put my application module(s) here # Run the application diff --git a/IQSS-slurm-examples/hello.R.slurm b/IQSS-slurm-examples/hello.R.slurm index b5686e5..bfc70d7 100644 --- a/IQSS-slurm-examples/hello.R.slurm +++ b/IQSS-slurm-examples/hello.R.slurm @@ -8,7 +8,7 @@ #SBATCH -o %x_%j.out # Standard out goes to this file #SBATCH -e %x_%j.err # Standard err goes to this file # Commands to run go on next lines: -module load intel/17.0.4-fasrc01 R/3.5.0-fasrc01 +module load intel/25.2.1-fasrc01 R/4.5.1-fasrc01 chmod u+x ./hello.R ./hello.R # Run R hello world. diff --git a/IQSS-slurm-examples/hello.julia.slurm b/IQSS-slurm-examples/hello.julia.slurm index 54b6e30..eff9612 100644 --- a/IQSS-slurm-examples/hello.julia.slurm +++ b/IQSS-slurm-examples/hello.julia.slurm @@ -8,7 +8,7 @@ #SBATCH -o %x_%j.out # Standard out goes to this file #SBATCH -e %x_%j.err # Standard err goes to this file # Commands to run go on next lines: -module load julia/1.1.1-fasrc01 +module load julia/1.0.0-ncf chmod u+x ./hello.jl ./hello.jl diff --git a/IQSS-slurm-examples/hello.mathematica.slurm b/IQSS-slurm-examples/hello.mathematica.slurm index bf13a10..8eb6d06 100644 --- a/IQSS-slurm-examples/hello.mathematica.slurm +++ b/IQSS-slurm-examples/hello.mathematica.slurm @@ -9,7 +9,7 @@ #SBATCH -e %x_%j.err # Standard err goes to this file # Commands to run go on next lines: -module load mathematica/11.3.0-fasrc01 +module load mathematica/13.3.0-fasrc01 math -noprompt -run "<< ./hello.math" # Run mathematica hello world. # To submit the job: diff --git a/IQSS-slurm-examples/hello.python2.slurm b/IQSS-slurm-examples/hello.python2.slurm index ab09e75..5e31f10 100644 --- a/IQSS-slurm-examples/hello.python2.slurm +++ b/IQSS-slurm-examples/hello.python2.slurm @@ -9,7 +9,7 @@ #SBATCH -e %x_%j.err # Standard err goes to this file # Commands to run go on next lines: -module load python/2.7.14-fasrc02 +module load python/3.12.11-fasrc02 chmod u+x ./hello.py2 ./hello.py2 diff --git a/IQSS-slurm-examples/multitask.example.R.slurm b/IQSS-slurm-examples/multitask.example.R.slurm index 7df24ec..f7613de 100644 --- a/IQSS-slurm-examples/multitask.example.R.slurm +++ b/IQSS-slurm-examples/multitask.example.R.slurm @@ -11,8 +11,8 @@ # Commands to run go on next lines: module purge > /dev/null 2>&1 -module load gcc/7.1.0-fasrc01 R/3.5.0-fasrc01 -module load intel/17.0.4-fasrc01 R/3.5.0-fasrc01 +module load gcc/15.2.0-fasrc01 R/4.5.1-fasrc01 +module load intel/25.2.1-fasrc01 R/4.5.1-fasrc01 chmod u+x multitask.example.R ./multitask.example.R "${SLURM_ARRAY_TASK_ID}" # Run R hello world.