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1 | 1 | # DO NOT EDIT, GENERATED AUTOMATICALLY |
2 | 2 |
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| 3 | +- id: doi:10.1093/nar/gkad1082 |
| 4 | + title: "The Monarch Initiative in 2024: an analytic platform integrating phenotypes,\ |
| 5 | + \ genes\_and diseases across species" |
| 6 | + authors: |
| 7 | + - Tim E Putman |
| 8 | + - Kevin Schaper |
| 9 | + - Nicolas Matentzoglu |
| 10 | + - "Vincent\_P Rubinetti" |
| 11 | + - "Faisal\_S Alquaddoomi" |
| 12 | + - Corey Cox |
| 13 | + - J Harry Caufield |
| 14 | + - Glass Elsarboukh |
| 15 | + - Sarah Gehrke |
| 16 | + - Harshad Hegde |
| 17 | + - "Justin\_T Reese" |
| 18 | + - Ian Braun |
| 19 | + - "Richard\_M Bruskiewich" |
| 20 | + - Luca Cappelletti |
| 21 | + - Seth Carbon |
| 22 | + - "Anita\_R Caron" |
| 23 | + - "Lauren\_E Chan" |
| 24 | + - "Christopher\_G Chute" |
| 25 | + - "Katherina\_G Cortes" |
| 26 | + - "Vin\xEDcius De\_Souza" |
| 27 | + - Tommaso Fontana |
| 28 | + - "Nomi\_L Harris" |
| 29 | + - "Emily\_L Hartley" |
| 30 | + - Eric Hurwitz |
| 31 | + - "Julius\_O B Jacobsen" |
| 32 | + - Madan Krishnamurthy |
| 33 | + - "Bryan\_J Laraway" |
| 34 | + - "James\_A McLaughlin" |
| 35 | + - "Julie\_A McMurry" |
| 36 | + - "Sierra\_A T Moxon" |
| 37 | + - "Kathleen\_R Mullen" |
| 38 | + - "Shawn\_T O\u2019Neil" |
| 39 | + - "Kent\_A Shefchek" |
| 40 | + - Ray Stefancsik |
| 41 | + - Sabrina Toro |
| 42 | + - "Nicole\_A Vasilevsky" |
| 43 | + - "Ramona\_L Walls" |
| 44 | + - "Patricia\_L Whetzel" |
| 45 | + - David Osumi-Sutherland |
| 46 | + - Damian Smedley |
| 47 | + - "Peter\_N Robinson" |
| 48 | + - "Christopher\_J Mungall" |
| 49 | + - "Melissa\_A Haendel" |
| 50 | + - "Monica\_C Munoz-Torres" |
| 51 | + publisher: Nucleic Acids Research |
| 52 | + date: '2023-11-24' |
| 53 | + link: https://doi.org/gs6kmr |
| 54 | + orcid: 0000-0002-4655-3773 |
| 55 | + plugin: orcid.py |
| 56 | + file: orcid.yaml |
| 57 | +- id: doi:10.1101/2023.10.11.560955 |
| 58 | + title: Integration of 168,000 samples reveals global patterns of the human gut microbiome |
| 59 | + authors: |
| 60 | + - Richard J. Abdill |
| 61 | + - Samantha P. Graham |
| 62 | + - Vincent Rubinetti |
| 63 | + - Frank W. Albert |
| 64 | + - Casey S. Greene |
| 65 | + - Sean Davis |
| 66 | + - Ran Blekhman |
| 67 | + publisher: Cold Spring Harbor Laboratory |
| 68 | + date: '2023-10-11' |
| 69 | + link: https://doi.org/gsvf5z |
| 70 | + orcid: 0000-0002-4655-3773 |
| 71 | + plugin: orcid.py |
| 72 | + file: orcid.yaml |
3 | 73 | - id: doi:10.1093/nar/gkad289 |
4 | 74 | title: 'MyGeneset.info: an interactive and programmatic platform for community-curated |
5 | 75 | and user-created collections of genes' |
|
64 | 134 | orcid: 0000-0002-4655-3773 |
65 | 135 | plugin: orcid.py |
66 | 136 | file: orcid.yaml |
| 137 | +- id: doi:10.1101/2022.02.18.461833 |
| 138 | + title: 'MolEvolvR: A web-app for characterizing proteins using molecular evolution |
| 139 | + and phylogeny' |
| 140 | + authors: |
| 141 | + - Jacob D Krol |
| 142 | + - Joseph T Burke |
| 143 | + - Samuel Z Chen |
| 144 | + - Lo Sosinski |
| 145 | + - Faisal S Alquaddoomi |
| 146 | + - Evan P Brenner |
| 147 | + - Ethan P Wolfe |
| 148 | + - Vince P Rubinetti |
| 149 | + - Shaddai Amolitos |
| 150 | + - Kellen M Reason |
| 151 | + - John B Johnston |
| 152 | + - Janani Ravi |
| 153 | + publisher: Cold Spring Harbor Laboratory |
| 154 | + date: '2022-02-22' |
| 155 | + link: https://doi.org/gstx7j |
| 156 | + orcid: 0000-0002-4655-3773 |
| 157 | + plugin: orcid.py |
| 158 | + file: orcid.yaml |
67 | 159 | - id: doi:10.1186/s13059-020-02021-3 |
68 | 160 | title: Compressing gene expression data using multiple latent space dimensionalities |
69 | 161 | learns complementary biological representations |
|
118 | 210 | - Kaiming He |
119 | 211 | - Jian Sun |
120 | 212 | publisher: NeurIPS 2016 |
121 | | - date: '2016-06-22' |
| 213 | + date: '2023-12-12' |
122 | 214 | link: https://arxiv.org/abs/1605.06409 |
123 | 215 | type: paper |
124 | 216 | image: images/1605.06409.png |
|
779 | 871 | - id: arxiv:2211.05781 |
780 | 872 | title: Demystify Transformers & Convolutions in Modern Image Deep Networks |
781 | 873 | authors: |
782 | | - - Jifeng Dai |
| 874 | + - Xiaowei Hu |
783 | 875 | - Min Shi |
784 | 876 | - Weiyun Wang |
785 | 877 | - Sitong Wu |
|
790 | 882 | - Jie Zhou |
791 | 883 | - Xiaogang Wang |
792 | 884 | - Yu Qiao |
793 | | - - Xiaowei Hu |
| 885 | + - Jifeng Dai |
794 | 886 | publisher: Arxiv Tech Report 2022 |
795 | | - date: '2022-11-11' |
| 887 | + date: '2023-12-04' |
796 | 888 | link: https://arxiv.org/abs/2211.05781 |
797 | 889 | type: paper |
798 | 890 | buttons: |
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