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update ggplot scatterplot tool #6715

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@hechth hechth commented Feb 3, 2025

FOR CONTRIBUTOR:

  • I have read the CONTRIBUTING.md document and this tool is appropriate for the tools-iuc repo.
  • License permits unrestricted use (educational + commercial)
  • This PR updates an existing tool or tool collection

Closes #6692

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hechth commented Feb 3, 2025

@bgruening ready for review

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@hechth can you please test in planemo what happens when you provide a file without a header? How does the UI react?

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hechth commented Feb 4, 2025

Well it just will always think there is a header ... so it treats the first line as a header.

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hechth commented Feb 4, 2025

@bgruening I added a select to choose whether there is a header or not

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@bernt-matthias bernt-matthias left a comment

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In hindsight I wish I would not have implemented galaxyproject/galaxy@2395e65.

An.extra tool that just adds metadata to a tabular file would have been better. Maybe such a tool would even be possible without duplicating the dataset.

Then you could just rely on the metadata here (and no conditional would be needed) and the user could use the additional tool to set the metadata of needed.

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Scatterplot: select the columns based on colnames rather than position in the table
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