Skip to content

Could not extract records from VCF file #6

@esraaelmligy

Description

@esraaelmligy

I get the following error upon execution of the program on my vcf file generated on mm10 genome:

Reading and loading the VCF file, starting time is: 2023-07-10 13:34:23.802924909 UTC
thread 'main' panicked at 'called Result::unwrap() on an Err value: " reading the file failed: \n Could not extract any records from the provided file!! \n, formatting the string failed"', src/main.rs:13:83
note: run with RUST_BACKTRACE=1 environment variable to display a backtrace

This is the code i am running with:

./bins/Linux/vcf2prot -f ~/Freebayes.vcf -r ~/mm10.fa -v -g st -o results

Can you please specify the reason for this and how can i solve it? Thank you so much in advance.

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions