News

All notable changes to Seurat will be documented in this file. The format is based on Keep a Changelog

[2.1.0] - 2017-10-12

Added

Support for using MAST and DESeq2 packages for differential expression testing in FindMarkers
Support for multi-modal single-cell data via @assay slot

Changed

Default DE test changed to Wilcoxon rank sum test

[2.0.1] - 2017-08-18

Added

Now available on CRAN
Updated documentation complete with examples
Example datasets: pbmc_small and cc.genes
C++ implementation for parts of FindVariableGenes
Minor bug fixes

[2.0.0] - 2017-07-26

Added

New method for aligning scRNA-seq datasets
Significant code restructuring
New methods for scoring gene expression and cell-cycle phases
New visualization features (do.hover, do.identify)