Support for bcf files

[explodecomputer]

Thanks for a very useful package. Do you have plans to allow vcfR to read bcf files? If not do you know of any that will?

[knausb]

I do not know of any R packages that will read BCF files. At some point I think I benchmarked BCF and the gzipped VCF and decided they performed very similarly. I would like to incorporate htslib into vcfR. #124 and #125 request this. However, I have yet to learn how to actually do this, and have not found a lot of time to code lately. So these have not been a high priority.

[explodecomputer]

Thanks for the fast reply!
I did a bit of research and it seems that VariantAnnotation will, though some of its functionality seems to break (e.g. reading just regions).