openEHRCondition not working in manuals

[SevKohler]

openFHIR/src/test/resources/kds_new/model/cluster/org.highmed/multiple_coding_icd10gm.v1.yml

Line 41 in b5329c5

openehrCondition:

does not work unsure if the fhirCXondition works

[gasperr]

fhirCondition seems to work, because KDS_Diagnose_bundle has this

openFHIR/src/test/resources/kds/diagnose/KDS_Diagnose_bundle.json

Line 128 in b5329c5

"code": "†",

which properly maps to '†' as asserted by this line in the test:

openFHIR/src/test/java/com/medblocks/openfhir/kds/DiagnoseTest.java

Line 203 in b5329c5

Assert.assertEquals("L", jsonObject.get("diagnose/diagnose:0/anatomische_lokalisation/name_der_körperstelle|code")

openehrconditon however really doesn't seem to work as expected. Taking a look.

[gasperr]

Fixed with #170

[SevKohler]

@gasperr still not working outputs always the last value in case of multiple coding cluster e.g. the value !

[gasperr]

And you're sure you're running the last version of the engine, built after this change?

[SevKohler]

{ "_type": "COMPOSITION", "name": { "_type": "DV_TEXT", "value": "Diagnose" }, "archetype_details": { "archetype_id": { "value": "openEHR-EHR-COMPOSITION.report.v1" }, "template_id": { "value": "KDS_Diagnose" }, "rm_version": "1.0.4" }, "language": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "ISO_639-1" }, "code_string": "de" }, "territory": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "ISO_3166-1" }, "code_string": "DE" }, "category": { "_type": "DV_CODED_TEXT", "value": "event", "defining_code": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "openehr" }, "code_string": "433" } }, "composer": { "_type": "PARTY_SELF" }, "context": { "_type": "EVENT_CONTEXT", "start_time": { "_type": "DV_DATE_TIME", "value": "2022-02-03T01:00:00" }, "setting": { "_type": "DV_CODED_TEXT", "value": "other care", "defining_code": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "openehr" }, "code_string": "238" } }, "other_context": { "_type": "ITEM_TREE", "name": { "_type": "DV_TEXT", "value": "Tree" }, "items": [ { "_type": "CLUSTER", "name": { "_type": "DV_TEXT", "value": "Fallidentifikation" }, "archetype_details": { "archetype_id": { "value": "openEHR-EHR-CLUSTER.case_identification.v0" }, "rm_version": "1.0.4" }, "items": [ { "_type": "ELEMENT", "name": { "_type": "DV_TEXT", "value": "Fall-Kennung" }, "value": { "_type": "DV_TEXT", "value": "encounter-id-1245" }, "archetype_node_id": "at0001" } ], "archetype_node_id": "openEHR-EHR-CLUSTER.case_identification.v0" } ], "archetype_node_id": "at0001" } }, "content": [ { "_type": "EVALUATION", "name": { "_type": "DV_TEXT", "value": "Diagnose" }, "archetype_details": { "archetype_id": { "value": "openEHR-EHR-EVALUATION.problem_diagnosis.v1" }, "rm_version": "1.0.4" }, "language": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "ISO_639-1" }, "code_string": "de" }, "encoding": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "IANA_character-sets" }, "code_string": "UTF-8" }, "subject": { "_type": "PARTY_SELF" }, "data": { "_type": "ITEM_TREE", "name": { "_type": "DV_TEXT", "value": "Structure" }, "items": [ { "_type": "ELEMENT", "name": { "_type": "DV_TEXT", "value": "Kodierte Diagnose" }, "value": { "_type": "DV_CODED_TEXT", "value": "Secondary malignant neoplasm of lymph node", "mappings": [ { "_type": "TERM_MAPPING", "match": "?", "target": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "http://terminology.hl7.org/CodeSystem/icd-o-3" }, "code_string": "C77.0", "preferred_term": "Malignant neoplasm of lymph nodes" } }, { "_type": "TERM_MAPPING", "match": "?", "target": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "http://fhir.de/CodeSystem/bfarm/alpha-id" }, "code_string": "057E3", "preferred_term": "secondary malignant neoplasm of lymph nodes" } }, { "_type": "TERM_MAPPING", "match": "?", "target": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "http://www.orpha.net" }, "code_string": "1777", "preferred_term": "lung cancer associated with hereditary syndromes" } }, { "_type": "TERM_MAPPING", "match": "?", "target": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "http://snomed.info/sct" }, "code_string": "128462008", "preferred_term": "Secondary malignant neoplasm of lymph node" } } ], "defining_code": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "http://fhir.de/CodeSystem/bfarm/icd-10-gm" }, "code_string": "C34.1" } }, "archetype_node_id": "at0002" }, { "_type": "CLUSTER", "name": { "_type": "DV_TEXT", "value": "Anatomische Lokalisation" }, "archetype_details": { "archetype_id": { "value": "openEHR-EHR-CLUSTER.anatomical_location.v1" }, "rm_version": "1.0.4" }, "items": [ { "_type": "ELEMENT", "name": { "_type": "DV_TEXT", "value": "Name der Körperstelle" }, "value": { "_type": "DV_CODED_TEXT", "value": "Respiratory tract, Upper lobe, bronchus or lung", "mappings": [ { "_type": "TERM_MAPPING", "match": "?", "target": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "http://terminology.hl7.org/CodeSystem/icd-o-3" }, "code_string": "C34.1", "preferred_term": "Upper lobe, bronchus or lung" } } ], "defining_code": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "http://snomed.info/sct" }, "code_string": "321667001" } }, "archetype_node_id": "at0001" }, { "_type": "ELEMENT", "name": { "_type": "DV_TEXT", "value": "Lateralität" }, "value": { "_type": "DV_CODED_TEXT", "value": "Left side", "defining_code": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "http://fhir.de/CodeSystem/dimdi/seitenlokalisation" }, "code_string": "L" } }, "archetype_node_id": "at0002" } ], "archetype_node_id": "openEHR-EHR-CLUSTER.anatomical_location.v1" }, { "_type": "ELEMENT", "name": { "_type": "DV_TEXT", "value": "Feststellungsdatum" }, "value": { "_type": "DV_DATE_TIME", "value": "2025-02-03T05:05:06" }, "archetype_node_id": "at0003" }, { "_type": "ELEMENT", "name": { "_type": "DV_TEXT", "value": "Schweregrad" }, "value": { "_type": "DV_CODED_TEXT", "value": "Severe", "defining_code": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "http://terminology.hl7.org/CodeSystem/condition-severity" }, "code_string": "24484000" } }, "archetype_node_id": "at0005" }, { "_type": "CLUSTER", "name": { "_type": "DV_TEXT", "value": "Lebensphase" }, "archetype_details": { "archetype_id": { "value": "openEHR-EHR-CLUSTER.lebensphase.v0" }, "rm_version": "1.0.4" }, "items": [ { "_type": "ELEMENT", "name": { "_type": "DV_TEXT", "value": "Beginn" }, "value": { "_type": "DV_CODED_TEXT", "value": "Start of adulthood phase", "defining_code": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "http://snomed.info/sct" }, "code_string": "424144002" } }, "archetype_node_id": "at0001" }, { "_type": "ELEMENT", "name": { "_type": "DV_TEXT", "value": "Ende" }, "value": { "_type": "DV_CODED_TEXT", "value": "End of middle age phase", "defining_code": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "http://snomed.info/sct" }, "code_string": "367640001" } }, "archetype_node_id": "at0002" } ], "archetype_node_id": "openEHR-EHR-CLUSTER.lebensphase.v0" }, { "_type": "CLUSTER", "name": { "_type": "DV_TEXT", "value": "Mehrfachkodierungskennzeichen_ICD-10-GM" }, "archetype_details": { "archetype_id": { "value": "openEHR-EHR-CLUSTER.multiple_coding_icd10gm.v1" }, "rm_version": "1.0.4" }, "items": [ { "_type": "ELEMENT", "name": { "_type": "DV_TEXT", "value": "Mehrfachkodierungkennzeichen" }, "value": { "_type": "DV_CODED_TEXT", "value": "†", "defining_code": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "local" }, "code_string": "at0002" } }, "archetype_node_id": "at0001" } ], "archetype_node_id": "openEHR-EHR-CLUSTER.multiple_coding_icd10gm.v1" }, { "_type": "CLUSTER", "name": { "_type": "DV_TEXT", "value": "Klinischer Status" }, "archetype_details": { "archetype_id": { "value": "openEHR-EHR-CLUSTER.problem_qualifier.v2" }, "rm_version": "1.0.4" }, "items": [ { "_type": "ELEMENT", "name": { "_type": "DV_TEXT", "value": "Klinischer Status" }, "value": { "_type": "DV_CODED_TEXT", "value": "active", "defining_code": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "http://terminology.hl7.org/CodeSystem/condition-clinical" }, "code_string": "active" } }, "archetype_node_id": "at0003" }, { "_type": "ELEMENT", "name": { "_type": "DV_TEXT", "value": "Diagnoserolle" }, "value": { "_type": "DV_CODED_TEXT", "value": "Nebendiagnose", "defining_code": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "local" }, "code_string": "at0066" } }, "archetype_node_id": "at0063" } ], "archetype_node_id": "openEHR-EHR-CLUSTER.problem_qualifier.v2" }, { "_type": "ELEMENT", "name": { "_type": "DV_TEXT", "value": "Diagnosesicherheit" }, "value": { "_type": "DV_CODED_TEXT", "value": "Confirmed diagnosis", "defining_code": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "http://fhir.de/CodeSystem/dimdi/diagnosesicherheit" }, "code_string": "G" } }, "archetype_node_id": "at0073" }, { "_type": "ELEMENT", "name": { "_type": "DV_TEXT", "value": "Diagnoseerläuterung" }, "value": { "_type": "DV_TEXT", "value": "Patient confirmed for secondary malignant neoplasm of lymph node." }, "archetype_node_id": "at0069" } ], "archetype_node_id": "at0001" }, "archetype_node_id": "openEHR-EHR-EVALUATION.problem_diagnosis.v1" }, { "_type": "EVALUATION", "name": { "_type": "DV_TEXT", "value": "Diagnose" }, "archetype_details": { "archetype_id": { "value": "openEHR-EHR-EVALUATION.problem_diagnosis.v1" }, "rm_version": "1.0.4" }, "language": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "ISO_639-1" }, "code_string": "de" }, "encoding": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "IANA_character-sets" }, "code_string": "UTF-8" }, "subject": { "_type": "PARTY_SELF" }, "data": { "_type": "ITEM_TREE", "name": { "_type": "DV_TEXT", "value": "Structure" }, "items": [ { "_type": "ELEMENT", "name": { "_type": "DV_TEXT", "value": "Kodierte Diagnose" }, "value": { "_type": "DV_CODED_TEXT", "value": "Malignant neoplasm of upper lobe, bronchus or lung", "mappings": [ { "_type": "TERM_MAPPING", "match": "?", "target": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "http://terminology.hl7.org/CodeSystem/icd-o-3" }, "code_string": "ref_C34.1", "preferred_term": "ref_Malignant neoplasm of upper lobe, bronchus or lung" } }, { "_type": "TERM_MAPPING", "match": "?", "target": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "http://fhir.de/CodeSystem/bfarm/alpha-id" }, "code_string": "ref_098H5", "preferred_term": "ref_Malignant neoplasm of upper lobe, bronchus or lung, unspecified" } }, { "_type": "TERM_MAPPING", "match": "?", "target": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "http://snomed.info/sct" }, "code_string": "ref_254626006", "preferred_term": "ref_Malignant neoplasm of the upper lobe of lung" } }, { "_type": "TERM_MAPPING", "match": "?", "target": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "http://www.orpha.net" }, "code_string": "ref_830", "preferred_term": "ref_Malignant neoplasm of upper lobe, bronchus or lung" } } ], "defining_code": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "http://fhir.de/CodeSystem/bfarm/icd-10-gm" }, "code_string": "ref_C34.1" } }, "archetype_node_id": "at0002" }, { "_type": "CLUSTER", "name": { "_type": "DV_TEXT", "value": "Anatomische Lokalisation" }, "archetype_details": { "archetype_id": { "value": "openEHR-EHR-CLUSTER.anatomical_location.v1" }, "rm_version": "1.0.4" }, "items": [ { "_type": "ELEMENT", "name": { "_type": "DV_TEXT", "value": "Name der Körperstelle" }, "value": { "_type": "DV_CODED_TEXT", "value": "Entire cardiovascular system", "mappings": [ { "_type": "TERM_MAPPING", "match": "?", "target": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "http://terminology.hl7.org/CodeSystem/icd-o-3" }, "code_string": "ref_C34.1", "preferred_term": "ref_Upper lobe, bronchus or lung" } } ], "defining_code": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "http://snomed.info/sct" }, "code_string": "ref_368209003" } }, "archetype_node_id": "at0001" }, { "_type": "ELEMENT", "name": { "_type": "DV_TEXT", "value": "Lateralität" }, "value": { "_type": "DV_CODED_TEXT", "value": "ref_Upper lobe", "defining_code": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "http://fhir.de/CodeSystem/dimdi/seitenlokalisation" }, "code_string": "ref_U" } }, "archetype_node_id": "at0002" } ], "archetype_node_id": "openEHR-EHR-CLUSTER.anatomical_location.v1" }, { "_type": "ELEMENT", "name": { "_type": "DV_TEXT", "value": "Feststellungsdatum" }, "value": { "_type": "DV_DATE_TIME", "value": "2125-02-03T05:05:06" }, "archetype_node_id": "at0003" }, { "_type": "ELEMENT", "name": { "_type": "DV_TEXT", "value": "Schweregrad" }, "value": { "_type": "DV_CODED_TEXT", "value": "ref_Severe", "defining_code": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "http://snomed.info/sct" }, "code_string": "ref_24484000" } }, "archetype_node_id": "at0005" }, { "_type": "CLUSTER", "name": { "_type": "DV_TEXT", "value": "Lebensphase" }, "archetype_details": { "archetype_id": { "value": "openEHR-EHR-CLUSTER.lebensphase.v0" }, "rm_version": "1.0.4" }, "items": [ { "_type": "ELEMENT", "name": { "_type": "DV_TEXT", "value": "Beginn" }, "value": { "_type": "DV_CODED_TEXT", "value": "ref_Start of adulthood phase", "defining_code": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "http://snomed.info/sct" }, "code_string": "ref_424144002" } }, "archetype_node_id": "at0001" }, { "_type": "ELEMENT", "name": { "_type": "DV_TEXT", "value": "Ende" }, "value": { "_type": "DV_CODED_TEXT", "value": "ref_End of middle age phase", "defining_code": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "http://snomed.info/sct" }, "code_string": "ref_367640001" } }, "archetype_node_id": "at0002" } ], "archetype_node_id": "openEHR-EHR-CLUSTER.lebensphase.v0" }, { "_type": "CLUSTER", "name": { "_type": "DV_TEXT", "value": "Mehrfachkodierungskennzeichen_ICD-10-GM" }, "archetype_details": { "archetype_id": { "value": "openEHR-EHR-CLUSTER.multiple_coding_icd10gm.v1" }, "rm_version": "1.0.4" }, "items": [ { "_type": "ELEMENT", "name": { "_type": "DV_TEXT", "value": "Mehrfachkodierungkennzeichen" }, "value": { "_type": "DV_CODED_TEXT", "value": "*", "defining_code": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "local" }, "code_string": "at0003" } }, "archetype_node_id": "at0001" } ], "archetype_node_id": "openEHR-EHR-CLUSTER.multiple_coding_icd10gm.v1" }, { "_type": "CLUSTER", "name": { "_type": "DV_TEXT", "value": "Klinischer Status" }, "archetype_details": { "archetype_id": { "value": "openEHR-EHR-CLUSTER.problem_qualifier.v2" }, "rm_version": "1.0.4" }, "items": [ { "_type": "ELEMENT", "name": { "_type": "DV_TEXT", "value": "Klinischer Status" }, "value": { "_type": "DV_CODED_TEXT", "value": "ref_active", "defining_code": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "http://terminology.hl7.org/CodeSystem/condition-clinical" }, "code_string": "ref_active" } }, "archetype_node_id": "at0003" }, { "_type": "ELEMENT", "name": { "_type": "DV_TEXT", "value": "Diagnoserolle" }, "value": { "_type": "DV_CODED_TEXT", "value": "Hauptdiagnose", "defining_code": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "local" }, "code_string": "at0064" } }, "archetype_node_id": "at0063" } ], "archetype_node_id": "openEHR-EHR-CLUSTER.problem_qualifier.v2" }, { "_type": "ELEMENT", "name": { "_type": "DV_TEXT", "value": "Diagnosesicherheit" }, "value": { "_type": "DV_CODED_TEXT", "value": "ref_Suspected diagnosis", "defining_code": { "_type": "CODE_PHRASE", "terminology_id": { "_type": "TERMINOLOGY_ID", "value": "http://fhir.de/CodeSystem/dimdi/diagnosesicherheit" }, "code_string": "ref_S" } }, "archetype_node_id": "at0073" }, { "_type": "ELEMENT", "name": { "_type": "DV_TEXT", "value": "Diagnoseerläuterung" }, "value": { "_type": "DV_TEXT", "value": "ref_The patient has a history of high blood pressure, now presenting with severe hypertension." }, "archetype_node_id": "at0069" } ], "archetype_node_id": "at0001" }, "archetype_node_id": "openEHR-EHR-EVALUATION.problem_diagnosis.v1" } ], "archetype_node_id": "openEHR-EHR-COMPOSITION.report.v1" }

Just run this and check the output of the merhfachcodierung its always !
Which is the last one in the manual clauses

[gasperr]

Oh nice one, I forgot to click merge on the PR..: #170

Now its merged..