document.tex

\documentclass[defaultstyle,10pt,Helvetica]{article}
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% The Preamble document contains all the necessary Packages for typesetting
% Modify it to suit your needs
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\input{preamble}
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% #############################################################################
% #############################################################################
\begin{document}
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% Add PDF bookmark 
\pdfbookmark[0]{Titlepage}{Title}
\input{cover}
\cleardoublepage
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% PAGE NUMBERING FOR INDEXING MATTER in ROMAN
\setcounter{page}{1} \pagenumbering{roman}
\baselineskip 18pt % line spacing: -12pt for single spacing
                   %               -18pt for 1 1/2 spacing
                   %               -24pt for double spacing
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% THE ACKNOWLEGMENTS
\pdfbookmark[0]{Acknowledgments}{acknowledgments}
\begin{acknowledgments}
	\input{chapters/acknowledgments.tex}
\end{acknowledgments}
%
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% This is required for the Fancy Chapters with minitoc
\dominitoc
\dominilof
\dominilot
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% Lists of Contents
\renewcommand{\baselinestretch}{1}
\pdfbookmark[0]{Contents}{toc}
\tableofcontents
%\contentsline{chapter}{References}{\pageref{bib}}
% If Printing on DOUBLE SIDED pages, the second page should be white.
% Otherwise, comment the following command:
\cleardoublepage
% reposition baseline
\renewcommand{\baselinestretch}{1.5}
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% List of Figures
\pdfbookmark[1]{List of Figures}{lof}
\listoffigures
\cleardoublepage
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\begingroup 
    \let\clearpage\relax
    \let\cleardoublepage\relax
    \let\cleardoublepage\relax
% List of Tables
\pdfbookmark[1]{List of Tables}{lot}
\listoftables
% If Printing on DOUBLE SIDED pages, the second page should be white.
% Otherwise, comment the following command:
\let\cleardoublepage\relax
%\cleardoublepage
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% List of Algorithms
% If not used, comments the lines!
% Requires packages algorithmic, algorithm
\pdfbookmark[1]{List of Algorithms}{loa}
\listofalgorithms
% If Printing on DOUBLE SIDED pages, the second page should be white.
\endgroup
% Otherwise, comment the following command:
\cleardoublepage
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% Listings
% If not used, comments the lines!
% Requires packages listings
\pdfbookmark[1]{Listings}{lol}
\lstlistoflistings
\cleardoublepage
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% % List of acronyms
\pdfbookmark[1]{Acronyms}{loac}
\chapter*{\tlangAcronyms}
\input{chapters/acronyms.tex}
% If Printing on DOUBLE SIDED pages, the second page should be white.
% Otherwise, comment the following command:
\cleardoublepage
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% PAGE NUMBERING FOR DOCUMENT MATTER in ARABIC
% Pages number is starting with arabic style. Until here were on roman mode
\setcounter{page}{1} \pagenumbering{arabic}
\baselineskip 18pt
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% This a suggestion for the Content of the Document
% Add more Chapters by duplicating a Chapter Block, pointing to the file
%Chapter 1
\acresetall
\input{chapters/chap001.tex}
% If Printing on DOUBLE SIDED pages, the second page should be white.
% Otherwise, comment the following command:
\cleardoublepage
%
%Chapter 2
\input{chapters/chap002.tex}
% If Printing on DOUBLE SIDED pages, the second page should be white.
% Otherwise, comment the following command:
\cleardoublepage
%
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% BIBLIOGRAPHY
% Add the Bibliography to the PDF table of contents (not the document table of contents)
\pdfbookmark[0]{bibliography}{bib}
% The bibliography style sheet
% Chose your preferences on the format of the entries and the Labels:
% IEEEtran: Used in general (recommended for IST Thesis)
%           Entries are labelled and sorted by appearance in the document
%           Labels are Numeric inside square brackets
\bibliographystyle{IEEEtran}
%
% Apalike:  Entries formatted alphabetically, last name first, with identation
%           Labels with Autor's Name and Year inside square brackets
%\bibliographystyle{apalike}
%
% Alpha:    Entries formatted with Autor's Name and Year, hanging identation
%           Labels with Autor's abbr. Names and Year inside square brackets
%\bibliographystyle{alpha}
%
% Acm:     Entries formatted with Autor's Name (small Caps), hanging identation
%          Labels are Numeric inside square brackets
%\bibliographystyle{acm}
% The following command resets the 'emphasis' style for bibliography entries
\normalem
% Name of your BiBTeX file
\bibliography{bibliography/references} % Put here your own filename
%
% The following command modifies the 'emphasis' style for bibliography entries
\ULforem
% If Printing on DOUBLE SIDED pages, the second page should be white.
% Otherwise, comment the following command:
\cleardoublepage
%
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% HERE GO THE APPENDIXES IF REQUIRED
% If not required just comment the blocks
\appendix
%% First Appendix
\pdfbookmark[1]{Appendix}{appendix}
\input{chapters/appendix.tex}
%% If Printing on DOUBLE SIDED pages, the second page should be white.
%% Otherwise, comment the following command:
\cleardoublepage

% -----------------------------------------------------------------------------
% And this is THE END of the IST Thesis Document
\end{document}