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Bug in FFTAtomProjection reverse-mode autodiff

bugSomething isn't workingSomething isn't working

Status: Open.

#566 In michael-0brien/cryojax;

· michael-0brien opened on Mar 18, 2026

Leakage in filter_bmap calls

bugSomething isn't workingSomething isn't working

Status: Open.

#564 In michael-0brien/cryojax;

· michael-0brien opened on Feb 10, 2026

Bug accounting for modes of RFFT arrays

bugSomething isn't workingSomething isn't working

Status: Open.

#563 In michael-0brien/cryojax;

· michael-0brien opened on Feb 10, 2026

Remove XLA scatters/gathers from simulation pipeline

efficiency

Status: Open.

#562 In michael-0brien/cryojax;

· michael-0brien opened on Feb 10, 2026

More accurate coverage estimates

unit tests

Status: Open.

#539 In michael-0brien/cryojax;

· michael-0brien opened on Jan 18, 2026

Ewald sphere surfaces from atoms

feature

Status: Open.

#499 In michael-0brien/cryojax;

· michael-0brien opened on Dec 2, 2025

Increasing test coverage

unit tests

Status: Open.

#491 In michael-0brien/cryojax;

· michael-0brien opened on Nov 25, 2025

amplitude contrast (inelastic scattering) in multislice

discussion

Status: Open.

#416 In michael-0brien/cryojax;

· geoffwoollard opened on Aug 25, 2025

Higher order CTF expansions

feature

Status: Open.

#408 In michael-0brien/cryojax;

· Miro-Astore opened on Jul 22, 2025

Whitening filter should be mean and variance preserving

enhancementNew feature or requestNew feature or request

Status: Open.

#387 In michael-0brien/cryojax;

· michael-0brien opened on Jun 3, 2025

Move features out of cryojax.experimental

unit tests

Status: Open.

#285 In michael-0brien/cryojax;

· michael-0brien opened on Dec 6, 2024

Allow varying defocus during imaging.

Status: Open.

#261 In michael-0brien/cryojax;

· Miro-Astore opened on Sep 3, 2024