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from tensorflow import keras
import tensorflow as tf
import numpy as np
import time
from sklearn.metrics import classification_report, confusion_matrix
from utils import (CLASS_LABELS, CLASS_NAMES, plot_auc_curve,
plot_confusion_matrix, plot_history, plot_metrics,
plot_precision_recall_curve, plot_roc_curve)
class Train_Evaluate_Deep():
def __init__(self,
predictions=None,
results=None,
probabilities=None,
performance=None):
self.predictions = {} if predictions is None else predictions
self.results = {} if results is None else results
self.probabilities = {} if probabilities is None else probabilities
self.performance = {} if performance is None else performance
def build_cnn(self, input_size, units=128, drop_rate=0.25, filter=32, kernel_size=(1*9), output_size=3):
input = keras.layers.Input((input_size))
x = keras.layers.Conv1D(filters=filter//2, kernel_size=kernel_size, padding='same', activation='relu', name="conv1")(input)
x = keras.layers.Conv1D(filters=filter, kernel_size=kernel_size, padding='same', activation='relu', name="conv2")(x)
x = keras.layers.Conv1D(filters=filter*2, kernel_size=kernel_size, padding='same', activation='relu', name="conv3")(x)
x = tf.keras.layers.Flatten()(x)
classifier = keras.layers.Dense(units*4, activation='relu')(x)
classifier = keras.layers.Dropout(drop_rate)(classifier)
classifier = keras.layers.Dense(units, activation='relu')(classifier)
classifier = keras.layers.Dropout(drop_rate)(classifier)
classifier = keras.layers.Dense(units//2, activation='relu')(classifier)
classifier = keras.layers.Dropout(drop_rate)(classifier)
output = keras.layers.Dense(output_size, activation='softmax')(classifier)
model = keras.Model(inputs=input, outputs=output)
return model
def build_lstm(self, input_size, units=128, drop_rate=0.25, lstm_units=16, output_size=3):
input = keras.layers.Input((input_size))
x = keras.layers.LSTM(units=lstm_units//2, input_shape=input_size, return_sequences=True, name="lstm1")(input)
x = keras.layers.LSTM(units=lstm_units, input_shape=input_size, return_sequences=True, name="lstm2")(x)
x = keras.layers.LSTM(units=lstm_units*2, input_shape=input_size, return_sequences=True, name="lstm3")(x)
x = tf.keras.layers.Flatten()(x)
classifier = keras.layers.Dense(units*4, activation='relu')(x)
classifier = keras.layers.Dropout(drop_rate)(classifier)
classifier = keras.layers.Dense(units, activation='relu')(classifier)
classifier = keras.layers.Dropout(drop_rate)(classifier)
classifier = keras.layers.Dense(units//2, activation='relu')(classifier)
classifier = keras.layers.Dropout(drop_rate)(classifier)
output = keras.layers.Dense(output_size, activation='softmax')(classifier)
model = keras.Model(inputs=input, outputs=output)
return model
def build_mlp(self, input_size, hidden_layer_size=128, output_size=3, drop_rate=0.25):
input = keras.layers.Input((input_size))
x = keras.layers.Dense(hidden_layer_size//4, activation='relu')(input)
x = keras.layers.Dense(hidden_layer_size//2, activation='relu')(x)
x = keras.layers.Dense(hidden_layer_size, activation='relu')(x)
x = tf.keras.layers.Flatten()(x)
classifier = keras.layers.Dense(hidden_layer_size*4, activation='relu')(x)
classifier = keras.layers.Dropout(drop_rate)(classifier)
classifier = keras.layers.Dense(hidden_layer_size, activation='relu')(classifier)
classifier = keras.layers.Dropout(drop_rate)(classifier)
classifier = keras.layers.Dense(hidden_layer_size//2, activation='relu')(classifier)
classifier = keras.layers.Dropout(drop_rate)(classifier)
output = keras.layers.Dense(output_size, activation='softmax')(classifier)
model = keras.Model(inputs=input, outputs=output)
return model
def build_AE(self, input_size, latent_dim=128, filter=64, kernel_size=(1*9)):
input = keras.layers.Input((input_size))
encoder = keras.layers.Conv1D(filters=filter//2, kernel_size=kernel_size, padding='same', activation='relu', name="conv1")(input)
encoder = keras.layers.Conv1D(filters=filter, kernel_size=kernel_size, padding='same', activation='relu', name="conv2")(encoder)
encoder = tf.keras.layers.Flatten()(encoder)
encoder = keras.layers.Dense(latent_dim*4, activation='relu')(encoder)
encoder = keras.layers.Dense(latent_dim*2, activation='relu')(encoder)
latent = keras.layers.Dense(latent_dim, activation='relu')(encoder)
decoder = keras.layers.Dense(latent_dim*2, activation='relu')(latent)
decoder = keras.layers.Dense(latent_dim*4, activation='relu')(decoder)
decoder = keras.layers.Dense(filter*input_size[0], activation='relu')(decoder)
decoder = keras.layers.Reshape((input_size[0], filter))(decoder)
decoder = keras.layers.Conv1DTranspose(filters=filter, kernel_size=kernel_size, padding='same', activation='relu')(decoder)
decoder = keras.layers.Conv1DTranspose(filters=filter//2, kernel_size=kernel_size, padding='same', activation='relu')(decoder)
output = keras.layers.Conv1DTranspose(filters=input_size[-1], kernel_size=kernel_size, padding='same', activation='relu')(decoder)
model = keras.Model(inputs=input, outputs=output)
return model
def train_deep_model(self,
model,
X_train,
y_train,
metrics,
loss_function,
optimizer,
callbacks,
class_weight=None,
epochs=100,
batch_size=128,
validation_split=0.2,
validation_data=None,
verbose=2):
print('----------------------------------')
model.summary()
print('----------------------------------')
model.compile(optimizer=optimizer,
loss=loss_function,
metrics=metrics)
fit_arguments = {
'batch_size': batch_size,
'epochs': epochs,
'shuffle': True,
'callbacks': callbacks,
'verbose': verbose,
}
if validation_data is None:
fit_arguments['validation_split'] = validation_split
else:
fit_arguments['validation_data'] = validation_data
if class_weight is not None:
fit_arguments['class_weight'] = class_weight
return model.fit(X_train, y_train, **fit_arguments)
def evaluate(self, model, X_test, y_test, batch_size=128, title='', model_name='',
plot=True, training_seconds=None):
model.predict(X_test[:min(batch_size, len(X_test))], batch_size=batch_size,
verbose=0)
inference_started = time.perf_counter()
prediction_scores = model.predict(X_test, batch_size=batch_size, verbose=0)
inference_seconds = time.perf_counter() - inference_started
prediction = np.argmax(prediction_scores, axis=1)
self.predictions[model_name] = prediction
self.probabilities[model_name] = prediction_scores
if plot:
print()
print('1) Plot ROC Curve...')
print()
plot_roc_curve(y_test, prediction_scores, title='ROC Curve of {model_name} Model'.format(model_name=model_name), model_name=model_name, file_name=None)
print()
print('2) Plot AUC Curve...')
print()
plot_auc_curve(y_test, prediction_scores, title='AUC Curve of {model_name} Model'.format(model_name=model_name), model_name=model_name, file_name = None)
print()
print('3) Plot Percision_Recall Curve......')
print()
plot_precision_recall_curve(y_test, prediction_scores, title='Percision_Recall Curve of {model_name} Model'.format(model_name=model_name), model_name=model_name, file_name=None)
report = classification_report(
y_test, prediction, labels=CLASS_LABELS, target_names=CLASS_NAMES,
output_dict=True, zero_division=0)
self.results[model_name] = report
self.performance[model_name] = {
'training_seconds': training_seconds,
'inference_seconds': inference_seconds,
'inference_ms_per_window': 1000 * inference_seconds / max(len(X_test), 1),
'model_size_bytes': int(sum(np.asarray(weight).nbytes for weight in model.get_weights())),
'parameter_count': int(model.count_params()),
'probability_classes': [0, 1, 2],
}
if plot:
print()
matrix = confusion_matrix(y_test, prediction, labels=CLASS_LABELS)
plot_confusion_matrix(matrix, title=title, class_names=CLASS_NAMES)
print()
return prediction
def plot_learning_curves(self, history):
print('1) Plot learning process based on different metrics...')
print()
plot_metrics(history)
print()
print('2) Plot learning curve...')
print()
return plot_history(history)