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Pull requests: opencb/opencga

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Pull requests list

TASK-7604 - Variant annotation fails when changing default data release for a CellBase version
#2577 opened Apr 15, 2025 by j-coll Loading…
1
TASK-7594 - variant-index: broken "skip-normalization" parameter
#2576 opened Apr 14, 2025 by j-coll Loading…
3
TASK-7605 - CatalogException: User 'opencga' could not be found.
#2575 opened Apr 14, 2025 by pfurio Loading…
2
TASK-7589 - Port Patch 2.12.8 -> 3.2.2 Xetabase 1.10.9 -> 2.2.3
#2574 opened Apr 11, 2025 by juanfeSanahuja Loading…
1
TASK-7508 - Fail to download files programmatically
#2573 opened Apr 3, 2025 by pfurio Loading…
1
TASK-7545 - Automatically add users to @members group in studies
#2572 opened Apr 2, 2025 by pfurio Loading…
1
TASK-5925 - Execute aggregation-family without ArchiveTable for non-gVCF files
#2571 opened Apr 2, 2025 by j-coll Loading…
5
TASK-7559 - Missing information for the rest response for individuals
#2570 opened Mar 28, 2025 by pfurio Loading…
1
TASK-7441 - CVDB CLI doesn't work
#2568 opened Mar 27, 2025 by juanfeSanahuja Loading…
1
TASK-7130 - Move reset password WebService
#2566 opened Mar 26, 2025 by pfurio Loading…
1
TASK-7477 - variant_walker.py may skip first variant
#2564 opened Mar 21, 2025 by j-coll Loading…
1
TASK-7479 - Variant walker fails when processing contigs with character ":"
#2563 opened Mar 21, 2025 by j-coll Loading…
1
TASK-7142 - OOME running calculate_pedigree_graph
#2532 opened Nov 22, 2024 by pfurio Loading…
1
TASK-7175 - Port Patch 2.0.1 -> 2.4.0
#2526 opened Nov 6, 2024 by juanfeSanahuja Loading…
1
TASK-5688 - Allow study administrators to synchronise groups from LDAP/Azure
#2521 opened Oct 17, 2024 by pfurio Loading…
1
TASK-6981 - Should not use same Solr timeout for reading and for indexing
#2512 opened Sep 27, 2024 by jtarraga Loading…
4
build(deps): bump org.apache.hadoop:hadoop-common from 2.10.0 to 3.4.0 in /opencga-storage/opencga-storage-hadoop/opencga-storage-hadoop-compat/opencga-storage-hadoop-compat-hbase2.4 dependencies Pull requests that update a dependency file java Pull requests that update Java code
#2508 opened Sep 25, 2024 by dependabot bot Loading…
TASK-6219 - Automatic Variant Secondary Index
#2495 opened Aug 19, 2024 by j-coll Loading…
2
TASK-6324 - Simplify QC analysis by launching a single job
#2469 opened Jun 19, 2024 by jtarraga Loading…
14
TASK-5278 - Add haploid calls treatment parameter to family-qc and relatedness
#2466 opened Jun 13, 2024 by jtarraga Loading…
TASK-2478
#2239 opened Jan 18, 2023 by pfurio Loading…
1
TASK-2304 Update the alignment QC to remove the hybrid selection (HS) metrics analysis
#2190 opened Nov 10, 2022 by jtarraga Loading…
1
TASK-1415 - Fix OpenCGA audit handling
#2162 opened Oct 6, 2022 by pfurio Loading…
1
TASK-1384
#2050 opened Jul 15, 2022 by j-coll • Draft
1
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