inconsistency in FBA flavour invocations #1248
Labels
enhancement
good first issue
This should be a good issue to start contributing to COBRApy.
help-wanted
An issue that should be easy to implement for anyone in the community.
Checklist
Is your feature related to a problem? Please describe it.
There are three flavours of FBA in cobra: FBA, pFBA, and geometric FBA. The plain FBA (model.optimise) has the argument
raise_error
to specify whether you want an exception to be raised. Neither pFBA nor geometric FBA has this argument. I think it would be nice if the invocation of all flavours of FBA would be consistent.Describe the solution you would like.
Within all three functions pattern
is used, but only in the plain FBA (model.optimise)
raise_error
is propagated intoget_solution
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