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[Native Image] JPA configuration with Graal 17 native image #10839

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slowbreathing opened this issue Mar 11, 2025 · 1 comment
Open
1 of 2 tasks

[Native Image] JPA configuration with Graal 17 native image #10839

slowbreathing opened this issue Mar 11, 2025 · 1 comment
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@fernando-valdez
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bug native-image

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@slowbreathing
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slowbreathing commented Mar 11, 2025 •
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Describe the Issue

(https://drive.google.com/file/d/1VhiNjbatpojBah1XOaYRBN8NKWDMkzpw/view?usp=sharing
)
Have been hitting this issue regularly with SpringBoot 3.4.x native image with graal 17.

Above is complete yet minimal sample that reproduces the problem. 2 sets of command produce similar but not identical errors.

Below are the commands to recreate it with Gradle 7.6.4 and Graal Java(TM) SE Runtime Environment Oracle GraalVM 17.0.11+7.1

  1. gradle build -x test :microservices:review-service:nativeCompile -Pprofile=instrumented &&
    docker compose -f docker-compose-app-native-instrumented.yml build &&
    docker compose -f docker-compose-app-native-instrumented.yml up

org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'entityManagerFactory': null
native-query-error3-review-1 | at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1812)
native-query-error3-review-1 | at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:601)
native-query-error3-review-1 | at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:523)
native-query-error3-review-1 | at org.springframework.beans.factory.support.AbstractBeanFactory.lambda$doGetBean$0(AbstractBeanFactory.java:339)
native-query-error3-review-1 | at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:346)
native-query-error3-review-1 | at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:337)
native-query-error3-review-1 | at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:207)
native-query-error3-review-1 | at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:970)
native-query-error3-review-1 | at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:627)
native-query-error3-review-1 | at org.springframework.boot.web.reactive.context.ReactiveWebServerApplicationContext.refresh(ReactiveWebServerApplicationContext.java:66)
native-query-error3-review-1 | at org.springframework.boot.SpringApplication.refresh(SpringApplication.java:752)
native-query-error3-review-1 | at org.springframework.boot.SpringApplication.refreshContext(SpringApplication.java:439)
native-query-error3-review-1 | at org.springframework.boot.SpringApplication.run(SpringApplication.java:318)
native-query-error3-review-1 | at org.springframework.boot.SpringApplication.run(SpringApplication.java:1361)
native-query-error3-review-1 | at org.springframework.boot.SpringApplication.run(SpringApplication.java:1350)
native-query-error3-review-1 | at com.stillwaters.playground.microservices.core.review.ReviewServiceApplication.main(ReviewServiceApplication.java:45)
native-query-error3-review-1 | Caused by: java.lang.ExceptionInInitializerError
native-query-error3-review-1 | at org.springframework.orm.jpa.vendor.SpringHibernateJpaPersistenceProvider.createContainerEntityManagerFactory(SpringHibernateJpaPersistenceProvider.java:54)
native-query-error3-review-1 | at org.springframework.orm.jpa.LocalContainerEntityManagerFactoryBean.createNativeEntityManagerFactory(LocalContainerEntityManagerFactoryBean.java:390)
native-query-error3-review-1 | at org.springframework.orm.jpa.AbstractEntityManagerFactoryBean.buildNativeEntityManagerFactory(AbstractEntityManagerFactoryBean.java:419)
native-query-error3-review-1 | at org.springframework.orm.jpa.AbstractEntityManagerFactoryBean.afterPropertiesSet(AbstractEntityManagerFactoryBean.java:400)
native-query-error3-review-1 | at org.springframework.orm.jpa.LocalContainerEntityManagerFactoryBean.afterPropertiesSet(LocalContainerEntityManagerFactoryBean.java:366)
native-query-error3-review-1 | at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1859)
native-query-error3-review-1 | at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1808)
native-query-error3-review-1 | ... 15 more
native-query-error3-review-1 | Caused by: java.lang.IllegalArgumentException: Invalid logger interface org.hibernate.internal.EntityManagerMessageLogger (implementation not found)
native-query-error3-review-1 | at org.jboss.logging.Logger.doGetMessageLogger(Logger.java:2630)
native-query-error3-review-1 | at org.jboss.logging.Logger.getMessageLogger(Logger.java:2570)
native-query-error3-review-1 | at org.jboss.logging.Logger.getMessageLogger(Logger.java:2552)
native-query-error3-review-1 | at org.hibernate.internal.HEMLogging.messageLogger(HEMLogging.java:28)
native-query-error3-review-1 | at org.hibernate.internal.HEMLogging.messageLogger(HEMLogging.java:24)
native-query-error3-review-1 | at org.hibernate.jpa.boot.internal.EntityManagerFactoryBuilderImpl.(EntityManagerFactoryBuilderImpl.java:144)
native-query-error3-review-1 | ... 22 more
native-query-error3-review-1 exited with code 1

2. gradle build -x test :microservices:review-service:bootBuildImage &&
docker compose -f docker-compose-app-native.yml up

Application run failed
native-query-error3-review-1 | org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'entityManagerFactory': null
native-query-error3-review-1 | at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1812)
native-query-error3-review-1 | at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:601)
native-query-error3-review-1 | at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:523)
native-query-error3-review-1 | at org.springframework.beans.factory.support.AbstractBeanFactory.lambda$doGetBean$0(AbstractBeanFactory.java:339)
native-query-error3-review-1 | at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:346)
native-query-error3-review-1 | at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:337)
native-query-error3-review-1 | at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:207)
native-query-error3-review-1 | at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:970)
native-query-error3-review-1 | at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:627)
native-query-error3-review-1 | at org.springframework.boot.web.reactive.context.ReactiveWebServerApplicationContext.refresh(ReactiveWebServerApplicationContext.java:66)
native-query-error3-review-1 | at org.springframework.boot.SpringApplication.refresh(SpringApplication.java:752)
native-query-error3-review-1 | at org.springframework.boot.SpringApplication.refreshContext(SpringApplication.java:439)
native-query-error3-review-1 | at org.springframework.boot.SpringApplication.run(SpringApplication.java:318)
native-query-error3-review-1 | at org.springframework.boot.SpringApplication.run(SpringApplication.java:1361)
native-query-error3-review-1 | at org.springframework.boot.SpringApplication.run(SpringApplication.java:1350)
native-query-error3-review-1 | at com.stillwaters.playground.microservices.core.review.ReviewServiceApplication.main(ReviewServiceApplication.java:45)
native-query-error3-review-1 | Caused by: java.lang.ExceptionInInitializerError
native-query-error3-review-1 | at org.hibernate.engine.jdbc.env.internal.JdbcEnvironmentInitiator.initiateService(JdbcEnvironmentInitiator.java:157)
native-query-error3-review-1 | at org.hibernate.engine.jdbc.env.internal.JdbcEnvironmentInitiator.initiateService(JdbcEnvironmentInitiator.java:81)
native-query-error3-review-1 | at org.hibernate.boot.registry.internal.StandardServiceRegistryImpl.initiateService(StandardServiceRegistryImpl.java:130)
native-query-error3-review-1 | at org.hibernate.service.internal.AbstractServiceRegistryImpl.createService(AbstractServiceRegistryImpl.java:263)
native-query-error3-review-1 | at org.hibernate.service.internal.AbstractServiceRegistryImpl.initializeService(AbstractServiceRegistryImpl.java:238)
native-query-error3-review-1 | at org.hibernate.service.internal.AbstractServiceRegistryImpl.getService(AbstractServiceRegistryImpl.java:215)
native-query-error3-review-1 | at org.hibernate.boot.model.relational.Database.(Database.java:45)
native-query-error3-review-1 | at org.hibernate.boot.internal.InFlightMetadataCollectorImpl.getDatabase(InFlightMetadataCollectorImpl.java:226)
native-query-error3-review-1 | at org.hibernate.boot.internal.InFlightMetadataCollectorImpl.(InFlightMetadataCollectorImpl.java:194)
native-query-error3-review-1 | at org.hibernate.boot.model.process.spi.MetadataBuildingProcess.complete(MetadataBuildingProcess.java:171)
native-query-error3-review-1 | at org.hibernate.jpa.boot.internal.EntityManagerFactoryBuilderImpl.metadata(EntityManagerFactoryBuilderImpl.java:1442)
native-query-error3-review-1 | at org.hibernate.jpa.boot.internal.EntityManagerFactoryBuilderImpl.build(EntityManagerFactoryBuilderImpl.java:1513)
native-query-error3-review-1 | at org.springframework.orm.jpa.vendor.SpringHibernateJpaPersistenceProvider.createContainerEntityManagerFactory(SpringHibernateJpaPersistenceProvider.java:66)
native-query-error3-review-1 | at org.springframework.orm.jpa.LocalContainerEntityManagerFactoryBean.createNativeEntityManagerFactory(LocalContainerEntityManagerFactoryBean.java:390)
native-query-error3-review-1 | at org.springframework.orm.jpa.AbstractEntityManagerFactoryBean.buildNativeEntityManagerFactory(AbstractEntityManagerFactoryBean.java:419)
native-query-error3-review-1 | at org.springframework.orm.jpa.AbstractEntityManagerFactoryBean.afterPropertiesSet(AbstractEntityManagerFactoryBean.java:400)
native-query-error3-review-1 | at org.springframework.orm.jpa.LocalContainerEntityManagerFactoryBean.afterPropertiesSet(LocalContainerEntityManagerFactoryBean.java:366)
native-query-error3-review-1 | at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1859)
native-query-error3-review-1 | at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1808)
native-query-error3-review-1 | ... 15 more
native-query-error3-review-1 | Caused by: java.lang.IllegalArgumentException: Invalid logger interface org.hibernate.internal.log.ConnectionInfoLogger (implementation not found)
native-query-error3-review-1 | at org.jboss.logging.Logger.doGetMessageLogger(Logger.java:2630)
native-query-error3-review-1 | at org.jboss.logging.Logger.getMessageLogger(Logger.java:2570)
native-query-error3-review-1 | at org.jboss.logging.Logger.getMessageLogger(Logger.java:2552)
native-query-error3-review-1 | at org.hibernate.internal.log.ConnectionInfoLogger.(ConnectionInfoLogger.java:38)
native-query-error3-review-1 | ... 34 more
native-query-error3-review-1 exited with code 1

Any help will be greatly appreciated.

Using the latest version of GraalVM can resolve many issues.

GraalVM Version

java version "17.0.11" 2024-04-16 LTS
Java(TM) SE Runtime Environment Oracle GraalVM 17.0.11+7.1 (build 17.0.11+7-LTS-jvmci-23.0-b34)
Java HotSpot(TM) 64-Bit Server VM Oracle GraalVM 17.0.11+7.1 (build 17.0.11+7-LTS-jvmci-23.0-b34, mixed mode, sharing)

Operating System and Version

Linux Nanus-Stillwaters 6.8.0-52-generic #53~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Wed Jan 15 19:18:46 UTC 2 x86_64 x86_64 x86_64 GNU/Linux

Troubleshooting Confirmation

Run Command

gradle build -x test :microservices:review-service:nativeCompile -Pprofile=instrumented &&
docker compose -f docker-compose-app-native-instrumented.yml build &&
docker compose -f docker-compose-app-native-instrumented.yml up

Expected Behavior

Expected it to run

Actual Behavior

Throw error and exits

Steps to Reproduce

gradle build -x test :microservices:review-service:nativeCompile -Pprofile=instrumented &&
docker compose -f docker-compose-app-native-instrumented.yml build &&
docker compose -f docker-compose-app-native-instrumented.yml up

Additional Context

No response

Run-Time Log Output and Error Messages

Application run failed
native-query-error3-review-1 | org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'entityManagerFactory': null
native-query-error3-review-1 | at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1812)
native-query-error3-review-1 | at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:601)
native-query-error3-review-1 | at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:523)
native-query-error3-review-1 | at org.springframework.beans.factory.support.AbstractBeanFactory.lambda$doGetBean$0(AbstractBeanFactory.java:339)
native-query-error3-review-1 | at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:346)
native-query-error3-review-1 | at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:337)
native-query-error3-review-1 | at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:207)
native-query-error3-review-1 | at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:970)
native-query-error3-review-1 | at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:627)
native-query-error3-review-1 | at org.springframework.boot.web.reactive.context.ReactiveWebServerApplicationContext.refresh(ReactiveWebServerApplicationContext.java:66)
native-query-error3-review-1 | at org.springframework.boot.SpringApplication.refresh(SpringApplication.java:752)
native-query-error3-review-1 | at org.springframework.boot.SpringApplication.refreshContext(SpringApplication.java:439)
native-query-error3-review-1 | at org.springframework.boot.SpringApplication.run(SpringApplication.java:318)
native-query-error3-review-1 | at org.springframework.boot.SpringApplication.run(SpringApplication.java:1361)
native-query-error3-review-1 | at org.springframework.boot.SpringApplication.run(SpringApplication.java:1350)
native-query-error3-review-1 | at com.stillwaters.playground.microservices.core.review.ReviewServiceApplication.main(ReviewServiceApplication.java:45)
native-query-error3-review-1 | Caused by: java.lang.ExceptionInInitializerError
native-query-error3-review-1 | at org.springframework.orm.jpa.vendor.SpringHibernateJpaPersistenceProvider.createContainerEntityManagerFactory(SpringHibernateJpaPersistenceProvider.java:54)
native-query-error3-review-1 | at org.springframework.orm.jpa.LocalContainerEntityManagerFactoryBean.createNativeEntityManagerFactory(LocalContainerEntityManagerFactoryBean.java:390)
native-query-error3-review-1 | at org.springframework.orm.jpa.AbstractEntityManagerFactoryBean.buildNativeEntityManagerFactory(AbstractEntityManagerFactoryBean.java:419)
native-query-error3-review-1 | at org.springframework.orm.jpa.AbstractEntityManagerFactoryBean.afterPropertiesSet(AbstractEntityManagerFactoryBean.java:400)
native-query-error3-review-1 | at org.springframework.orm.jpa.LocalContainerEntityManagerFactoryBean.afterPropertiesSet(LocalContainerEntityManagerFactoryBean.java:366)
native-query-error3-review-1 | at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1859)
native-query-error3-review-1 | at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1808)
native-query-error3-review-1 | ... 15 more
native-query-error3-review-1 | Caused by: java.lang.IllegalArgumentException: Invalid logger interface org.hibernate.internal.EntityManagerMessageLogger (implementation not found)
native-query-error3-review-1 | at org.jboss.logging.Logger.doGetMessageLogger(Logger.java:2630)
native-query-error3-review-1 | at org.jboss.logging.Logger.getMessageLogger(Logger.java:2570)
native-query-error3-review-1 | at org.jboss.logging.Logger.getMessageLogger(Logger.java:2552)
native-query-error3-review-1 | at org.hibernate.internal.HEMLogging.messageLogger(HEMLogging.java:28)
native-query-error3-review-1 | at org.hibernate.internal.HEMLogging.messageLogger(HEMLogging.java:24)
native-query-error3-review-1 | at org.hibernate.jpa.boot.internal.EntityManagerFactoryBuilderImpl.(EntityManagerFactoryBuilderImpl.java:144)
native-query-error3-review-1 | ... 22 more
native-query-error3-review-1 exited with code 1
@fernando-valdez fernando-valdez self-assigned this Mar 12, 2025
@fernando-valdez
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Hello @slowbreathing, seems like you are using a very old version of GraalVM. Please use the latest release of GraalVM JDK17 and let me know if the issue persists.

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