diff --git a/images.toml b/images.toml index b74289f1..b6c654fa 100644 --- a/images.toml +++ b/images.toml @@ -8,6 +8,7 @@ cellregmap = '0.0.3' cpg_hail = '0.2.134.cpg1' cpg_hail_gcloud = '0.2.134.cpg1' clinvarbitration = '1.5.1' +deepvariant = '1.9.0' dragmap = '1.3.0-tokenizer-next-fix' echtvar = 'v0.2.1' exomiser = '13.3.0' diff --git a/images/deepvariant/Dockerfile b/images/deepvariant/Dockerfile new file mode 100644 index 00000000..2e2f6946 --- /dev/null +++ b/images/deepvariant/Dockerfile @@ -0,0 +1,9 @@ +# Use official Google DeepVariant image as base +ARG VERSION=1.9.0 + +# Choose CPU or GPU variant +FROM google/deepvariant:${VERSION} as deepvariant_base + +# Final image with DeepVariant + additional tools +FROM deepvariant_base +LABEL maintainer="https://github.com/google/deepvariant/issues" \ No newline at end of file diff --git a/images/deepvariant_pangenome_aware/Dockerfile b/images/deepvariant_pangenome_aware/Dockerfile new file mode 100644 index 00000000..5b063870 --- /dev/null +++ b/images/deepvariant_pangenome_aware/Dockerfile @@ -0,0 +1,9 @@ +# Use official Google DeepVariant image as base +ARG VERSION=1.9.0 + +# Choose CPU or GPU variant +FROM google/deepvariant:pangenome_aware_deepvariant-${VERSION} as deepvariant_base + +# Final image with DeepVariant + additional tools +FROM deepvariant_base +LABEL maintainer="https://github.com/google/deepvariant/issues" \ No newline at end of file