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| 1 | +#include <stdio.h> |
| 2 | +#include "mpi.h" |
| 3 | +#include "hdf5.h" |
| 4 | +#include <unistd.h> |
| 5 | +#include <fcntl.h> |
| 6 | +#include <stdlib.h> |
| 7 | +#include <math.h> |
| 8 | +#include <string.h> |
| 9 | +#include <sys/time.h> |
| 10 | +#include <sys/vfs.h> |
| 11 | +#include <sys/ioctl.h> |
| 12 | + |
| 13 | +// LUSTRE Structure |
| 14 | +// from /usr/include/lustre/lustre_user.h |
| 15 | +#define LUSTRE_SUPER_MAGIC 0x0BD00BD0 |
| 16 | +# define LOV_USER_MAGIC 0x0BD10BD0 |
| 17 | +# define LL_IOC_LOV_SETSTRIPE _IOW ('f', 154, long) |
| 18 | +# define LL_IOC_LOV_GETSTRIPE _IOW ('f', 155, long) |
| 19 | +#define O_LOV_DELAY_CREATE 0100000000 |
| 20 | + |
| 21 | +struct lov_user_ost_data { // per-stripe data structure |
| 22 | + uint64_t l_object_id; // OST object ID |
| 23 | + uint64_t l_object_gr; // OST object group (creating MDS number) |
| 24 | + uint32_t l_ost_gen; // generation of this OST index |
| 25 | + uint32_t l_ost_idx; // OST index in LOV |
| 26 | +} __attribute__((packed)); |
| 27 | +struct lov_user_md { // LOV EA user data (host-endian) |
| 28 | + uint32_t lmm_magic; // magic number = LOV_USER_MAGIC_V1 |
| 29 | + uint32_t lmm_pattern; // LOV_PATTERN_RAID0, LOV_PATTERN_RAID1 |
| 30 | + uint64_t lmm_object_id; // LOV object ID |
| 31 | + uint64_t lmm_object_gr; // LOV object group |
| 32 | + uint32_t lmm_stripe_size; // size of stripe in bytes |
| 33 | + uint16_t lmm_stripe_count; // num stripes in use for this object |
| 34 | + uint16_t lmm_stripe_offset; // starting stripe offset in lmm_objects |
| 35 | + struct lov_user_ost_data lmm_objects[0]; // per-stripe data |
| 36 | +} __attribute__((packed)); |
| 37 | + |
| 38 | +int main (int argc, char ** argv) |
| 39 | +{ |
| 40 | + int old_mask; |
| 41 | + int perm, f; |
| 42 | + int i, j, k, rank; |
| 43 | + |
| 44 | + MPI_Init (&argc, &argv); |
| 45 | + MPI_Comm_rank (MPI_COMM_WORLD, &rank); |
| 46 | + |
| 47 | + old_mask = umask (0); |
| 48 | + umask (old_mask); |
| 49 | + perm = old_mask ^ 0666; |
| 50 | + |
| 51 | + char temp_string[100], dataset_name[100]; |
| 52 | + |
| 53 | + sprintf (temp_string |
| 54 | + ,"%s%d.h5" |
| 55 | + ,"interf" |
| 56 | + ,rank |
| 57 | + ); |
| 58 | + |
| 59 | + k = 0; |
| 60 | + |
| 61 | + |
| 62 | + unlink (temp_string); // clean up old stuff |
| 63 | + |
| 64 | + struct timeval t1; |
| 65 | + gettimeofday (&t1, NULL); |
| 66 | + |
| 67 | + f = open (temp_string |
| 68 | + ,O_RDONLY | O_CREAT | O_LOV_DELAY_CREATE |
| 69 | + ,perm |
| 70 | + ); |
| 71 | + |
| 72 | + struct lov_user_md lum; |
| 73 | + lum.lmm_magic = LOV_USER_MAGIC; |
| 74 | + lum.lmm_pattern = 0; |
| 75 | + lum.lmm_stripe_size = 0; |
| 76 | + lum.lmm_stripe_count = 1; |
| 77 | + lum.lmm_stripe_offset = rank; |
| 78 | + ioctl (f, LL_IOC_LOV_SETSTRIPE |
| 79 | + ,(void *) &lum |
| 80 | + ); |
| 81 | + close (f); |
| 82 | + |
| 83 | + hid_t fid = H5Fopen (temp_string, H5F_ACC_RDWR, H5P_DEFAULT); |
| 84 | + |
| 85 | + if (fid < 0) |
| 86 | + { |
| 87 | + fid = H5Fcreate (temp_string, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); |
| 88 | + if (fid < 0) |
| 89 | + { |
| 90 | + fprintf (stderr, "HDF5 ERROR: " |
| 91 | + "cannot open/create %s\n" |
| 92 | + ,temp_string); |
| 93 | + return -1; |
| 94 | + } |
| 95 | + } |
| 96 | + |
| 97 | + hid_t h5_dataset_id; |
| 98 | + hid_t h5_dataspace_id, h5_memspace_id; |
| 99 | + herr_t status; |
| 100 | + int vrank = 2; |
| 101 | + hsize_t h5_localdims[vrank]; |
| 102 | + // 512x512 is 2M |
| 103 | + int NX = 512*4; |
| 104 | + int NY = 512*2; |
| 105 | + h5_localdims[0] = NY; |
| 106 | + h5_localdims[1] = NX; |
| 107 | + double my_data[NY][NX]; |
| 108 | + |
| 109 | + for (i = 0; i < NY; i++) |
| 110 | + for (j =0; j < NX; j++) |
| 111 | + my_data[i][j] = i + j + vrank; |
| 112 | + |
| 113 | + h5_dataspace_id = H5Screate_simple (vrank, h5_localdims, NULL); |
| 114 | + |
| 115 | + sprintf (dataset_name, "var"); |
| 116 | +// h5_dataset_id = H5Dopen (fid, dataset_name); |
| 117 | + |
| 118 | + h5_dataset_id = H5Dcreate (fid |
| 119 | + ,dataset_name |
| 120 | + ,H5T_NATIVE_DOUBLE |
| 121 | + ,h5_dataspace_id |
| 122 | + ,H5P_DEFAULT |
| 123 | + ); |
| 124 | + |
| 125 | + status = H5Dwrite (h5_dataset_id |
| 126 | + ,H5T_NATIVE_DOUBLE |
| 127 | + ,H5S_ALL |
| 128 | + ,H5S_ALL |
| 129 | + ,H5P_DEFAULT |
| 130 | + ,&my_data[0][0] |
| 131 | + ); |
| 132 | + |
| 133 | + if (status == 0) |
| 134 | + { |
| 135 | +// printf ("%d th iteration is done.\n", k); |
| 136 | + } |
| 137 | + else |
| 138 | + { |
| 139 | + printf ("%d th iteration has error.\n", k); |
| 140 | + } |
| 141 | + k++; |
| 142 | + |
| 143 | + H5Dclose (h5_dataset_id); |
| 144 | + H5Sclose (h5_dataspace_id); |
| 145 | + H5Fclose (fid); |
| 146 | + |
| 147 | + struct timeval t2; |
| 148 | + gettimeofday (&t2, NULL); |
| 149 | + |
| 150 | + printf("%d %.6lf\n", rank, t2.tv_sec + t2.tv_usec/1000000.0 - t1.tv_sec - t1.tv_usec/1000000.0); |
| 151 | + |
| 152 | + MPI_Finalize (); |
| 153 | + |
| 154 | + return 0; |
| 155 | +} |
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