From cd742539f75784e89af47d9e0aa420f78d92c522 Mon Sep 17 00:00:00 2001 From: Wei Shen Date: Thu, 22 Sep 2022 16:30:21 +0800 Subject: [PATCH] v0.13.0 --- doc/docs/download.md | 9 ++++++--- 1 file changed, 6 insertions(+), 3 deletions(-) diff --git a/doc/docs/download.md b/doc/docs/download.md index c0aa0f0..2290656 100644 --- a/doc/docs/download.md +++ b/doc/docs/download.md @@ -6,13 +6,16 @@ ## Current Version -- [TaxonKit v0.13.0](https://github.com/shenwei356/taxonkit/releases/tag/v0.13.0) [![Github Releases (by Release)](https://img.shields.io/github/downloads/shenwei356/taxonkit/v0.13.0/total.svg)](https://github.com/shenwei356/taxonkit/releases/tag/v0.13.0) +- [TaxonKit v0.13.0](https://github.com/shenwei356/taxonkit/releases/tag/v0.13.0) +[![Github Releases (by Release)](https://img.shields.io/github/downloads/shenwei356/taxonkit/v0.13.0/total.svg)](https://github.com/shenwei356/taxonkit/releases/tag/v0.13.0) - `taxonkit reformat`: - add a new placeholder `{K}` for rank `kingdom`. [#64](https://github.com/shenwei356/taxonkit/issues/64) - do not panic for invalid TaxIds, e.g., the column name, when using `-I--taxid-field`. - `taxonkit create-taxdump`: - fix merged.dmp and delnodes.dmp. Thanks to @apcamargo ! [gtdb-taxdump/issues/2](https://github.com/shenwei356/gtdb-taxdump/issues/2). - - fix bug of handling non-GTDB data when using `-A/--field-accession` and no rank names given. + - fix bug of handling non-GTDB data when using `-A/--field-accession` and no rank names given: + the colname of the accession column would be treated as one of the ranks, which messed up all the ranks. + - fix the default option value of `--field-accession-re` which wrongly remove prefix like `Sp_`. [#65](https://github.com/shenwei356/taxonkit/issues/65) - `taxonkit list`: - fix warning message of merged taxids. @@ -32,7 +35,7 @@ OS |Arch |File, 中国镜像 |Download Count :------|:---------|:-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|:----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Linux |**64-bit**|[**taxonkit_linux_amd64.tar.gz**](https://github.com/shenwei356/taxonkit/releases/download/v0.13.0/taxonkit_linux_amd64.tar.gz),
[中国镜像](http://app.shenwei.me/data/taxonkit/taxonkit_linux_amd64.tar.gz) |[![Github Releases (by Asset)](https://img.shields.io/github/downloads/shenwei356/taxonkit/latest/taxonkit_linux_amd64.tar.gz.svg?maxAge=3600)](https://github.com/shenwei356/taxonkit/releases/download/v0.13.0/taxonkit_linux_amd64.tar.gz) -Linux |**arm64**|[**taxonkit_linux_arm64.tar.gz**](https://github.com/shenwei356/taxonkit/releases/download/v0.13.0/taxonkit_linux_arm64.tar.gz),
[中国镜像](http://app.shenwei.me/data/taxonkit/taxonkit_linux_arm64.tar.gz) |[![Github Releases (by Asset)](https://img.shields.io/github/downloads/shenwei356/taxonkit/latest/taxonkit_linux_arm64.tar.gz.svg?maxAge=3600)](https://github.com/shenwei356/taxonkit/releases/download/v0.13.0/taxonkit_linux_arm64.tar.gz) +Linux |**arm64** |[**taxonkit_linux_arm64.tar.gz**](https://github.com/shenwei356/taxonkit/releases/download/v0.13.0/taxonkit_linux_arm64.tar.gz),
[中国镜像](http://app.shenwei.me/data/taxonkit/taxonkit_linux_arm64.tar.gz) |[![Github Releases (by Asset)](https://img.shields.io/github/downloads/shenwei356/taxonkit/latest/taxonkit_linux_arm64.tar.gz.svg?maxAge=3600)](https://github.com/shenwei356/taxonkit/releases/download/v0.13.0/taxonkit_linux_arm64.tar.gz) macOS |**64-bit**|[**taxonkit_darwin_amd64.tar.gz**](https://github.com/shenwei356/taxonkit/releases/download/v0.13.0/taxonkit_darwin_amd64.tar.gz),
[中国镜像](http://app.shenwei.me/data/taxonkit/taxonkit_darwin_amd64.tar.gz) |[![Github Releases (by Asset)](https://img.shields.io/github/downloads/shenwei356/taxonkit/latest/taxonkit_darwin_amd64.tar.gz.svg?maxAge=3600)](https://github.com/shenwei356/taxonkit/releases/download/v0.13.0/taxonkit_darwin_amd64.tar.gz) macOS |**arm64** |[**taxonkit_darwin_arm64.tar.gz**](https://github.com/shenwei356/taxonkit/releases/download/v0.13.0/taxonkit_darwin_arm64.tar.gz),
[中国镜像](http://app.shenwei.me/data/taxonkit/taxonkit_darwin_arm64.tar.gz) |[![Github Releases (by Asset)](https://img.shields.io/github/downloads/shenwei356/taxonkit/latest/taxonkit_darwin_arm64.tar.gz.svg?maxAge=3600)](https://github.com/shenwei356/taxonkit/releases/download/v0.13.0/taxonkit_darwin_arm64.tar.gz) Windows|**64-bit**|[**taxonkit_windows_amd64.exe.tar.gz**](https://github.com/shenwei356/taxonkit/releases/download/v0.13.0/taxonkit_windows_amd64.exe.tar.gz),
[中国镜像](http://app.shenwei.me/data/taxonkit/taxonkit_windows_amd64.exe.tar.gz)|[![Github Releases (by Asset)](https://img.shields.io/github/downloads/shenwei356/taxonkit/latest/taxonkit_windows_amd64.exe.tar.gz.svg?maxAge=3600)](https://github.com/shenwei356/taxonkit/releases/download/v0.13.0/taxonkit_windows_amd64.exe.tar.gz)