Revert "quick fix file loading done (#2064)" (#2078)

rmmiller22 · web-flow · commit 0ebf3741e858 · 2021-06-29T09:17:56.000-05:00
This reverts commit 2600c70.
diff --git a/TaskLayer/GlycoSearchTask/GlycoSearchTask.cs b/TaskLayer/GlycoSearchTask/GlycoSearchTask.cs
@@ -99,8 +99,6 @@ protected override MyTaskResults RunSpecific(string OutputFolder, List<DbForTask
                 Status("Getting ms2 scans...", thisId);
 
                 Ms2ScanWithSpecificMass[] arrayOfMs2ScansSortedByMass = GetMs2Scans(myMsDataFile, origDataFile, combinedParams).OrderBy(b => b.PrecursorMass).ToArray();
-                myFileManager.DoneWithFile(origDataFile);
-
                 List<GlycoSpectralMatch>[] newCsmsPerMS2ScanPerFile = new List<GlycoSpectralMatch>[arrayOfMs2ScansSortedByMass.Length];
 
                 for (int currentPartition = 0; currentPartition < CommonParameters.TotalPartitions; currentPartition++)
diff --git a/TaskLayer/XLSearchTask/XLSearchTask.cs b/TaskLayer/XLSearchTask/XLSearchTask.cs
@@ -95,7 +95,7 @@ protected override MyTaskResults RunSpecific(string OutputFolder, List<DbForTask
                 Status("Getting ms2 scans...", thisId);
 
                 Ms2ScanWithSpecificMass[] arrayOfMs2ScansSortedByMass = GetMs2Scans(myMsDataFile, origDataFile, combinedParams).OrderBy(b => b.PrecursorMass).ToArray();
-                myFileManager.DoneWithFile(origDataFile);
+
                 List<CrosslinkSpectralMatch>[] newCsmsPerMS2ScanPerFile = new List<CrosslinkSpectralMatch>[arrayOfMs2ScansSortedByMass.Length];
                 for (int currentPartition = 0; currentPartition < CommonParameters.TotalPartitions; currentPartition++)
                 {

Original file line number	Diff line number	Diff line change
`@@ -95,7 +95,7 @@ protected override MyTaskResults RunSpecific(string OutputFolder, List<DbForTask`
`95`	`95`	`Status("Getting ms2 scans...", thisId);`
`96`	`96`
`97`	`97`	`Ms2ScanWithSpecificMass[] arrayOfMs2ScansSortedByMass = GetMs2Scans(myMsDataFile, origDataFile, combinedParams).OrderBy(b => b.PrecursorMass).ToArray();`
`98`		`- myFileManager.DoneWithFile(origDataFile);`
	`98`	`+`
`99`	`99`	`List<CrosslinkSpectralMatch>[] newCsmsPerMS2ScanPerFile = new List<CrosslinkSpectralMatch>[arrayOfMs2ScansSortedByMass.Length];`
`100`	`100`	`for (int currentPartition = 0; currentPartition < CommonParameters.TotalPartitions; currentPartition++)`
`101`	`101`	`{`