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replace VICE instructions w/ launch button (#225)
* replace VICE instructions w/ launch button * Update index.Rmd Co-Authored-By: Kristina Riemer <[email protected]> * Update index.Rmd Co-Authored-By: Kristina Riemer <[email protected]>
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index.Rmd

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@@ -41,26 +41,20 @@ At a minimum, you should have:
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Launching TERRA REF app on VICE:
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1. Google "Cyverse" and click link to website
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2. Select Products tab
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3. Under "Discovery Environment", select Launch button
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4. Hit "Log in with your CyVerse ID" button
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5. Log in with CyVerse credentials (username and password)
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6. Select "Apps", type in "terra", select "TERRA REF Rstudio 3.6.0", and "Use App"
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7. Click "Launch Analysis", hit Analysis button, and select arrow button in Analyses window
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8. Wait patiently
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9. Sign into RStudio using username: rstudio and password: rstudio1
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1. Click this button <a href="https://de.cyverse.org/de/?type=quick-launch&quick-launch-id=27203e0f-e2a1-4846-be0c-e97cb6ef60f2&app-id=041dd9c4-b964-11e9-a238-008cfa5ae621" target="_blank"><img src="https://de.cyverse.org/Powered-By-CyVerse-blue.svg"></a>
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2. Click "Log in with your CyVerse ID" and log in using your CyVerse username and password
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3. Hit "Launch Analysis" button in pop up window, and select arrow button in Analyses window
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4. Wait patiently
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5. Sign into RStudio using username: rstudio and password: rstudio1
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Reopen running TERRA REF instance:
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1. Google "Cyverse" and click link to website
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2. Select Products tab
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3. Under "Discovery Environment", select Launch button
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4. Hit "Log in with your CyVerse ID" button
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5. Log in with CyVerse credentials (username and password)
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6. Open Analyses window and hit arrow button to open up RStudio
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1. Open the [CyVerse Discovery Environment](https://de.cyverse.org/de/)
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2. Log in
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3. Open Analyses window and hit arrow button to open up RStudio
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**Option 2** Everything necessary can be installed locally instead of using the VICE app.
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You will need to [install R](https://www.r-project.org/) and a handful of R packages.
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All of the packages except `traits` are available on CRAN and can be installed using the `install.packages` function:
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knitr::opts_chunk$set(cache = TRUE, message = FALSE, eval = FALSE)
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ggplot2::theme_set(ggthemes::theme_few())
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```
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