GitHub Dashboard 2025-03-09 12:11:50 UTC Repo Stars Subscribers Issues Forks Status Commit theislab/single-cell-best-practices 856 18 73 204 76dd78 theislab/scvelo 431 12 63 105 22b6e7 theislab/scvelo 431 12 63 105 f89590 theislab/cellrank 372 8 19 48 75c6c9 theislab/cellrank 372 8 19 48 b5e993 theislab/scib 336 12 40 66 023c4e theislab/single-cell-transformer-papers 301 13 40 37 687ba3 theislab/ehrapy 276 4 46 23 3cd860 theislab/ehrapy 276 4 46 23 4c4db5 theislab/zellkonverter 159 4 14 28 61ef0d theislab/moscot 140 4 40 9 364958 theislab/moscot 140 4 40 9 46e8f6 theislab/sfaira 136 7 167 11 55bcbb theislab/anndata2ri 132 6 13 18 42655d theislab/scib-pipeline 68 5 16 29 e97631 theislab/graphcompass 35 2 1 1 7c4551 theislab/regvelo 35 2 0 1 619e02 theislab/regvelo 35 2 0 1 a98518 theislab/spapros 33 2 13 7 1ec08e theislab/spapros 33 2 13 7 2f6c1a theislab/mubind 28 3 29 0 3f62f8 theislab/hadge 24 3 15 7 1ed105 theislab/multimil 23 4 8 3 c721ba theislab/geome 16 3 3 4 402a0a theislab/scanpydoc 12 5 2 6 3b5b7b theislab/cellrank2_reproducibility 9 1 2 2 8020e7 theislab/vevo_Tahoe_100m_analysis 9 1 1 1 95810f theislab/ehrapy-datasets 7 1 0 2 e441a5 theislab/spapros-pipeline 7 1 0 0 fe84cf theislab/ehrdata 5 2 21 1 9070ac theislab/regvelo_reproducibility 4 0 0 0 56512e theislab/gh-dashboard 3 2 0 0 044354 theislab/devVI 0 1 0 0 6eed83 theislab/idtrack 0 1 6 0 ec9e9f theislab/mapqc 0 1 0 0 027800 Repos without Github Actions Repo Stars Subscribers Issues Forks theislab/single-cell-tutorial 1450 30 21 470 theislab/scarches 354 11 56 53 theislab/scgen 284 8 28 57 theislab/dca 254 10 32 70 theislab/paga 213 9 24 33 theislab/diffxpy 196 6 108 23 theislab/kBET 161 7 10 23 theislab/scCODA 157 8 6 24 theislab/sc-pert 150 4 6 14 theislab/chemCPA 109 3 7 25 theislab/ncem 107 5 29 13 theislab/cpa 95 4 21 16 theislab/destiny 82 4 31 11 theislab/nicheformer 82 5 17 4 theislab/AutoGeneS 59 5 6 8 theislab/scib-reproducibility 58 5 4 16 theislab/scTab 57 4 3 9 theislab/trVAE 56 5 3 12 theislab/spatial_scog_workshop_2022 52 8 0 26 theislab/pseudodynamics 40 6 0 6 theislab/DRVI 38 1 4 3 theislab/tcellmatch 38 8 3 7 theislab/scvelo_notebooks 34 1 5 13 theislab/scArches-reproducibility 33 3 5 0 theislab/deepflow 31 4 1 14 theislab/DeepRT 30 1 11 10 theislab/neural_organoid_atlas 29 6 3 4 theislab/prophet 29 4 0 2 theislab/batchglm 27 2 47 10 theislab/graph_abstraction 26 7 0 10 theislab/Covid_meta_analysis 24 7 2 11 theislab/scgen-reproducibility 24 3 7 9 theislab/interactive_plotting 21 3 11 7 theislab/multigrate 20 1 6 6 theislab/campa 15 3 6 5 theislab/cellrank_reproducibility 14 2 1 8 theislab/DeepCollisionalCrossSection 14 4 1 6 theislab/greatpy 14 3 4 0 theislab/inVAE 14 3 0 2 theislab/multicpa 14 2 1 2 theislab/scanpy-in-R 14 2 1 0 theislab/scPoli_reproduce 14 3 2 4 theislab/ncem_tutorials 13 3 6 0 theislab/GWAS-scRNAseq-Integration 12 4 0 12 theislab/IMPA 12 2 0 1 theislab/moscot-framework_reproducibility 12 2 1 4 theislab/moslin 12 1 0 1 theislab/ssl_in_scg 12 1 1 2 theislab/cross_system_integration 11 2 11 2 theislab/MetaMap 11 6 0 8 theislab/cpa-reproducibility 10 2 1 2 theislab/diffxpy_tutorials 10 7 4 2 theislab/expiMap_reproducibility 10 4 3 4 theislab/gastrulation_analysis 10 3 0 1 theislab/scAnalysisTutorial 10 2 0 3 theislab/superexacttestpy 10 2 3 0 theislab/ehrapy-tutorials 9 2 1 2 theislab/enrichment_analysis_celltype 9 4 0 4 theislab/PathReg 9 3 0 0 theislab/scatac_poisson_reproducibility 9 2 0 0 theislab/trvaep 9 2 0 6 theislab/2018_Angelidis 8 3 0 6 theislab/2020_Mayr 8 5 0 8 theislab/jump-cpg0016-segmentation 8 1 0 0 theislab/moscot_notebooks 8 1 8 4 theislab/mouse_cross-condition_pancreatic_islet_atlas 8 2 0 4 theislab/ncem_benchmarks 8 3 4 2 theislab/sc-best-practices-ce 8 7 2 3 theislab/scachepy 8 4 3 1 theislab/scCODA_reproducibility 8 4 0 1 theislab/squidpy_reproducibility 8 1 0 7 theislab/tissue_tensorflow 8 3 0 0 theislab/2019_Strunz 7 4 1 11 theislab/CFGen 7 1 0 4 theislab/pancreatic-endocrinogenesis 7 2 0 7 theislab/cellrank_notebooks 6 3 1 5 theislab/disent 6 2 0 0 theislab/intercode 6 2 1 1 theislab/multimil_reproducibility 6 3 4 1 theislab/sfaira_tutorials 6 3 4 2 theislab/theislab.github.io 6 1 9 0 theislab/trVAE_reproducibility 6 2 2 7 theislab/atlas-feature-selection-benchmark 5 2 0 0 theislab/flowVI 5 3 0 0 theislab/InterpretableAutoencoders 5 3 0 0 theislab/kbranches 5 6 0 0 theislab/scanpy-demo-czbiohub 5 4 0 5 theislab/singlecell_proteomics 5 4 6 3 theislab/spatial_atlas_ssl 5 2 0 0 theislab/2022_Tritschler_pancreas_cross_species 4 3 0 1 theislab/archmap 4 2 3 0 theislab/cell_flow_perturbation 4 0 47 1 theislab/covid-perturbation 4 2 0 0 theislab/feature-attribution-sc 4 2 8 1 theislab/LODE 4 1 9 0 theislab/moscot_benchmarks 4 2 1 1 theislab/perturbation-metrics 4 2 1 0 theislab/sc_mae 4 1 0 0 theislab/task-dge-perturbation-prediction-analysis 4 2 1 1 theislab/cellrank_reproducibility_preprint 3 1 0 0 theislab/DRVI_reproducibility 3 3 0 1 theislab/ehrapy-reproducibility 3 1 1 0 theislab/extended-single-cell-best-practices-container 3 3 2 1 theislab/moscot_not 3 2 8 1 theislab/multigrate_reproducibility 3 1 0 0 theislab/multires-consensus-clustering 3 3 9 0 theislab/nbconvertR 3 2 1 2 theislab/pertpy-reproducibility 3 2 0 1 theislab/scPoli_legacy 3 5 0 0 theislab/sc_analysis_template 3 2 0 0 theislab/svaeligr 3 3 0 0 theislab/txsim 3 2 40 1 theislab/2020_iPS_Lung_Differentiation 2 4 0 2 theislab/2021_Aliluev_Tritschler_gut_HFD 2 3 0 1 theislab/bartseq-pipeline 2 3 0 3 theislab/campa_ana 2 3 0 0 theislab/covid_macrophages_integration 2 4 0 5 theislab/epicardiods_analysis 2 2 1 0 theislab/flexible_priors 2 1 0 0 theislab/gut_lineage 2 2 0 3 theislab/HPA_reproducibility 2 2 0 1 theislab/HRCA-reproducibility 2 4 0 1 theislab/interaction-tools 2 3 0 0 theislab/LineagePulse 2 4 0 0 theislab/LungInjuryRegeneration 2 7 0 0 theislab/masterpraktikum_ssl_segmentation 2 3 0 2 theislab/scanpy_squidpy_demo_2021 2 3 0 1 theislab/tissue 2 3 0 0 theislab/2021_PRMT7_regulates_Monocyte_Extravasation 1 3 0 2 theislab/archmap_data 1 0 2 0 theislab/astrocytes_reprogramming_analysis 1 4 0 0 theislab/augurpy 1 1 10 0 theislab/autoencoderPS 1 2 0 2 theislab/bartSeq 1 4 1 5 theislab/bindome 1 3 5 1 theislab/countae 1 3 0 0 theislab/ehrapy-cli 1 2 0 0 theislab/ehrapy-site 1 2 0 0 theislab/ifcseq 1 2 0 1 theislab/MS_mv_modelling 1 2 0 1 theislab/spapros_reproducibility 1 1 0 1 theislab/spatialdata-db 1 1 27 0 theislab/tardis 1 1 1 2 theislab/tissue_reproducibility 1 3 0 0 theislab/transcription_factor_activity 1 1 5 1 theislab/unbalanced_monge_maps_single_cell 1 1 0 0 theislab/zebrafish_bipolarity 1 3 0 1 theislab/2015-grn-inference 0 2 0 0 theislab/2020_Inhibition_LTbetaR-signalling 0 3 0 3 theislab/2022_Bakhti_pancreas_Syt13 0 2 0 0 theislab/archmap_admin 0 2 0 0 theislab/archmap_doc 0 3 0 0 theislab/collideseq_reproducibility 0 2 0 0 theislab/consensus-clustering-evaluation 0 3 0 0 theislab/dali 0 6 0 1 theislab/deconvATAC 0 1 1 0 theislab/edgepy 0 3 0 0 theislab/ELS_analysis 0 2 0 0 theislab/GoBI_single_cell 0 2 0 0 theislab/hadge-reproducibility 0 2 0 0 theislab/icml_cbw_2022_clcvae 0 3 0 0 theislab/integraph 0 2 4 0 theislab/inVAE_reproducibility 0 2 0 0 theislab/ipsc_ipd_analysis 0 2 0 0 theislab/LungAgingAtlas 0 4 0 0 theislab/MetaMap-web 0 3 2 0 theislab/mubind-benchmark 0 2 19 0 theislab/multicpa-reproducibility 0 2 0 0 theislab/organoid_dexamethasone_stimulation 0 2 0 1 theislab/pancreas-targeted_pharmacology 0 5 1 2 theislab/pdac_analysis 0 2 0 0 theislab/prophet-reproducibility 0 3 0 0 theislab/reproducability_AutoGeneS 0 2 0 0 theislab/reproducibility_AutoGeneS 0 2 0 0 theislab/scanpy.org 0 6 1 0 theislab/scanpy_neighbors 0 2 0 1 theislab/scarches_notebooks 0 2 0 0 theislab/scProtVelo 0 1 0 0 theislab/sc_ketamine_analysis 0 3 0 0 theislab/sfaira-portal 0 3 2 0 theislab/sfaira-site 0 3 0 0 theislab/sfaira_benchmarks 0 2 0 0 theislab/sfaira_extension 0 2 1 0 theislab/spapros-smk 0 2 0 1 theislab/spatialdata-db-submission 0 2 0 0
