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As you know, windows filesystem paths are 'C:\<path\to\project>\<path\in\project>.php' but AbstractUnitObject::getSourceFile() returns 'C:/<path/to/project>/<path/in/project>.php', which means that the indices in CheckStyle.findings[] never match.
I've fixed this temporarily on my machine by adding a str_replace for directory slashes to the enrichUnit() function of src/generator/enricher/checkstyle/CheckStyle.php (and it works!) but since this is a really ugly hack, instead of making a pull request I'm leaving an issue so you can figure out if there's more internals that need to be changed.