-
Improvements
- Better documentation
-
New functionality
list_to_randomized()
function- Parallelization article
- Improvements
reconstruct_pattern_homo()
has arguments to specify number of points and windowreconstruct_pattern_marks()
allows to have different number of points forpattern
andmarked_pattern
argument
- Improvements
- Include new
spatstat
package structure - Use GPL3 License
- Include new
- Improvements
- Add logo
- Update to MIT License
- renamed
master
tomain
branch
- Improvements
- Use
energy_df
to get energy for printing if available - Updated tests
- More stable progress printing
- Use
- Improvements
- No calculation of energy for printing (too slow)
- Improvements
- Printing methods for most objects
- Possibility to specify intervals of r for all reconstruction functions
- New functionality
plot_energy()
to plot energy over iterations for reconstructed patternsreconstruct_pattern_hetero()
allows to reconstruct heterogeneous patterns
- Renameing/Structure
reconstruct_pattern()
was split to three functions:reconstruct_pattern_homo()
,reconstruct_pattern_hetero()
,reconstruct_pattern_cluster()
,reconstruct_marks()
is now calledreconstruct_pattern_marks()
- Improvements
- Annealing probability can be specified for reconstruction
- Improvements
- Easier user experience because classes are used to specify provided input
results_habitat_associations()
checks if extent of inputs is identicalreconstruct_marks()
andcalculate_energy()
use now weights for the summary functions
- Bugfixes
- Bug in
calculate_energy()
for reconstructed marks
- Bug in
- Improvements
- Better structure of vignettes
- Adding CONTRIBUTING.md
- Trying to fix some failing tests for older R versions
- New functionality
- Allowing to translate raster only in n steps
- Improvements
plot_randomized_pattern()
now uses envelopes to plot randomized summary functionsplot_randomized_pattern()
includes a quantum barplot_randomized_pattern()
now can return plots after each other (Press )calculate_engery()
can also calculate the energy for marked reconstructions- Improved warning messages
- Bugfixes
- Explicitly C++11 compiler
- New functionality
plot_randomized_pattern()
to plot randomized rasters
- Improvements
- minor speed improvment for
reconstruct_pattern()
,reconstruct_marks()
andcalculate_energy()
- The starting pattern is now identical for all n_random and only the relocation process differs between randomizations
- All summary functions are only calculated for 250 steps from 0 to
rmax
- minor speed improvment for
- Bugfixes
- New functionality
rcpp_sample()
as a faster Rcpp implementation ofsample()
- Improvements
- Replaced
cat()
withmessage()
for all printing to console - All defaults set to
n_random = 1
comp_fast
argument equals TRUE if number of points exceed thresholdreconstruct_pattern()
stops if energy did not decrease for n iterationsreconstruct_marks()
stops if energy did not decrease for n iterationsplot_randomized_pattern()
can also plot point patterns
- Replaced
- Bugfixes
- Bug in
fit_point_process()
that more points as present could be removed from simulated pattern - Bug in
reconstruct_pattern()
that more points as present could be removed from simulated pattern
- Bug in
- First submission to CRAN