diff --git a/README.md b/README.md index c7e5b22..8b4eec2 100644 --- a/README.md +++ b/README.md @@ -10,21 +10,12 @@ Open a new terminal and clone this repository git clone https://github.com/schallerdavid/pyrod.git ~/pyrod ``` #### Install dependencies -PyRod is written in python 3.8 and uses MDAnalysis (>= 0.19.0, is shipped with NumPy and SciPy), NumPy and SciPy which can be easily installed using pip: +PyRod is written in Python 3.8 and relies on MDAnalysis (version >= 0.19.0, which includes NumPy and SciPy), as well as NumPy and SciPy themselves. All dependencies can be easily installed alongside PyRod using pip from within the PyRod directory: ```bash -pip3 install --upgrade MDAnalysis +cd PATH/TO/pyrod ``` -or ```bash -python3 -m pip install --upgrade MDAnalysis -``` -You can also use conda to install all dependencies: -```bash -conda create -n pyrod -c conda-forge mdanalysis python=3.8 -``` -#### Create alias for your bash -```bash -echo 'alias pyrod="python3 ~/pyrod/pyrod.py"' >> ~/.bashrc +pip install . ``` ## Run PyRod #### Load conda environment (optional)