Skip to content

AkimovLab/Project_ML_EFG

Folders and files

NameName
Last commit message
Last commit date

Latest commit

Β 

History

5 Commits
Β 
Β 
Β 
Β 
Β 
Β 
Β 
Β 
Β 
Β 

Repository files navigation

Project_ML_EFG

This repository contains all the pythonic file and data files required for performing ML mapping approach to predict the electric field gradient tensors from the Kohn-Sham Fock operator, density, and atomic orbital overlap matrices.

The tree of the files is as follows:

.
β”œβ”€β”€ 1_generate_data
β”‚Β Β  β”œβ”€β”€ 1_Na
β”‚Β Β  β”‚Β Β  β”œβ”€β”€ Na_atomic_guess_density.npy
β”‚Β Β  β”‚Β Β  β”œβ”€β”€ Na_atomic_guess_ham.npy
β”‚Β Β  β”‚Β Β  β”œβ”€β”€ Na_atomic_guess_overlap.npy
β”‚Β Β  β”‚Β Β  β”œβ”€β”€ Na_ref_efg.npy
β”‚Β Β  β”‚Β Β  β”œβ”€β”€ Na_xtb_guess_density.npy
β”‚Β Β  β”‚Β Β  β”œβ”€β”€ Na_xtb_guess_ham.npy
β”‚Β Β  β”‚Β Β  β”œβ”€β”€ Na_xtb_guess_overlap.npy
β”‚Β Β  β”‚Β Β  β”œβ”€β”€ run_calc.py
β”‚Β Β  β”‚Β Β  β”œβ”€β”€ submit_template.slm
β”‚Β Β  β”‚Β Β  └── xtb.inp
β”‚Β Β  β”œβ”€β”€ 2_I
β”‚Β Β  β”‚Β Β  β”œβ”€β”€ I_atomic_guess_density.npy
β”‚Β Β  β”‚Β Β  β”œβ”€β”€ I_atomic_guess_ham.npy
β”‚Β Β  β”‚Β Β  β”œβ”€β”€ I_atomic_guess_overlap.npy
β”‚Β Β  β”‚Β Β  β”œβ”€β”€ I_ref_efg.npy
β”‚Β Β  β”‚Β Β  β”œβ”€β”€ I_xtb_guess_densities.npy
β”‚Β Β  β”‚Β Β  β”œβ”€β”€ I_xtb_guess_density.npy
β”‚Β Β  β”‚Β Β  β”œβ”€β”€ I_xtb_guess_ham.npy
β”‚Β Β  β”‚Β Β  β”œβ”€β”€ I_xtb_guess_hams.npy
β”‚Β Β  β”‚Β Β  β”œβ”€β”€ I_xtb_guess_overlap.npy
β”‚Β Β  β”‚Β Β  β”œβ”€β”€ I_xtb_guess_overlaps.npy
β”‚Β Β  β”‚Β Β  β”œβ”€β”€ run_calc.py
β”‚Β Β  β”‚Β Β  β”œβ”€β”€ submit_template.slm
β”‚Β Β  β”‚Β Β  └── xtb.inp
β”‚Β Β  β”œβ”€β”€ 3_Cs
β”‚Β Β  β”‚Β Β  β”œβ”€β”€ Cs_atomic_guess_density.npy
β”‚Β Β  β”‚Β Β  β”œβ”€β”€ Cs_atomic_guess_ham.npy
β”‚Β Β  β”‚Β Β  β”œβ”€β”€ Cs_atomic_guess_overlap.npy
β”‚Β Β  β”‚Β Β  β”œβ”€β”€ Cs_ref_efg.npy
β”‚Β Β  β”‚Β Β  β”œβ”€β”€ Cs_xtb_guess_density.npy
β”‚Β Β  β”‚Β Β  β”œβ”€β”€ Cs_xtb_guess_ham.npy
β”‚Β Β  β”‚Β Β  β”œβ”€β”€ Cs_xtb_guess_overlap.npy
β”‚Β Β  β”‚Β Β  β”œβ”€β”€ run_calc.py
β”‚Β Β  β”‚Β Β  β”œβ”€β”€ submit_template.slm
β”‚Β Β  β”‚Β Β  └── xtb.inp
β”‚Β Β  └── extract_data.py
β”œβ”€β”€ 2_ml_mapping
β”‚Β Β  └── ml_mapping.ipynb
β”œβ”€β”€ 3_dynpy_calc
β”‚Β Β  └── compute_properties.py
β”œβ”€β”€ LICENSE
└── README.md

6 directories, 38 files

About

No description, website, or topics provided.

Resources

License

Stars

Watchers

Forks

Packages

No packages published

Contributors 2

  •  
  •