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Arc Research Institute

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  1. evo2 evo2 Public

    Genome modeling and design across all domains of life

    Jupyter Notebook 2.5k 239

  2. arc-virtual-cell-atlas arc-virtual-cell-atlas Public

    Arc Virtual Cell Atlas

    Jupyter Notebook 213 18

  3. SRAgent SRAgent Public

    LLM agents for working with the SRA and associated bioinformatics databases.

    Python 36 2

  4. ScreenPro2 ScreenPro2 Public

    Flexible analysis of high-content CRISPR screening

    Python 28 5

  5. scRecounter scRecounter Public

    Nextflow pipeline to re-process all public single-cell RNA-seq data

    Jupyter Notebook 10 1

  6. RNAtargeting_web_custom RNAtargeting_web_custom Public

    source code of the custom page for the RNA targeting website - Cas13d guide design

    C 5

Repositories

Showing 10 of 10 repositories
  • evo2 Public

    Genome modeling and design across all domains of life

    ArcInstitute/evo2’s past year of commit activity
    Jupyter Notebook 2,452 Apache-2.0 239 22 1 Updated Mar 6, 2025
  • scRecounter Public

    Nextflow pipeline to re-process all public single-cell RNA-seq data

    ArcInstitute/scRecounter’s past year of commit activity
    Jupyter Notebook 10 MIT 1 0 0 Updated Mar 5, 2025
  • SRAgent Public

    LLM agents for working with the SRA and associated bioinformatics databases.

    ArcInstitute/SRAgent’s past year of commit activity
    Python 36 MIT 2 0 0 Updated Mar 5, 2025
  • arc-virtual-cell-atlas Public

    Arc Virtual Cell Atlas

    ArcInstitute/arc-virtual-cell-atlas’s past year of commit activity
    Jupyter Notebook 213 18 4 0 Updated Mar 5, 2025
  • scBaseCamp_analysis Public

    Analysis of scBaseCamp data

    ArcInstitute/scBaseCamp_analysis’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Feb 27, 2025
  • ScreenPro2 Public

    Flexible analysis of high-content CRISPR screening

    ArcInstitute/ScreenPro2’s past year of commit activity
    Python 28 5 11 (1 issue needs help) 0 Updated Feb 10, 2025
  • arc-cluster-toolkit Public Forked from GoogleCloudPlatform/cluster-toolkit

    Cluster Toolkit is an open-source software offered by Google Cloud which makes it easy for customers to deploy AI/ML and HPC environments on Google Cloud.

    ArcInstitute/arc-cluster-toolkit’s past year of commit activity
    HCL 1 Apache-2.0 175 0 0 Updated Dec 26, 2024
  • InVivoMultimodalPerturbation Public Forked from weallen/InVivoMultimodalPerturbation
    ArcInstitute/InVivoMultimodalPerturbation’s past year of commit activity
    Python 0 1 0 0 Updated Aug 29, 2024
  • bridge-rna-designer Public

    A command line and web interface for designing Bridge RNAs for Bridge Editing.

    ArcInstitute/bridge-rna-designer’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Aug 25, 2024
  • RNAtargeting_web_custom Public

    source code of the custom page for the RNA targeting website - Cas13d guide design

    ArcInstitute/RNAtargeting_web_custom’s past year of commit activity
    C 5 MIT 0 1 0 Updated Mar 7, 2024

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