Releases: CCPBioSim/aiida-gromacs
Releases · CCPBioSim/aiida-gromacs
Release list
v2.2.1
What's Changed
- Update
masterdefault branch tomainby @harryswift01 in #291 - Update to version 2.2.1 by @github-actions[bot] in #292
Full Changelog: 2.2.0...2.2.1
v2.2.0
What's Changed
- Include Zenodo DOI within
README.mdby @harryswift01 in #282 - Update DOI badge link in
README.mdby @harryswift01 in #286 - Add Conda packaging and automated Anaconda release workflow by @harryswift01 in #288
- Update to version 2.2.0 by @github-actions[bot] in #289
Full Changelog: 2.1.2...2.2.0
v2.1.2
What's Changed
- Bump softprops/action-gh-release from 2.4.2 to 2.5.0 by @dependabot[bot] in #225
- Bump peter-evans/create-pull-request from 7.0.9 to 7.0.11 by @dependabot[bot] in #232
- Fix for parallel coverage occasionally messing up by @jimboid in #230
- Bump actions/checkout from 6.0.0 to 6.0.1 by @dependabot[bot] in #226
- Fix fully-qualified
QbFieldspath in Sphinx nitpicky config by @harryswift01 in #243 - Bump peter-evans/create-pull-request from 7.0.11 to 8.0.0 by @dependabot[bot] in #233
- Isolate CI Testing Strategies for
pre-commit,docsandtestingby @harryswift01 in #240 - Add CONTRIBUTING Guidelines and Pull Request Template by @harryswift01 in #241
- Automate yearly copyright update in license file by @harryswift01 in #244
- Add Renovate configuration for dependency management by @harryswift01 in #245
- Introduce
CITATION.cfffile to formalise citation of the repository by @harryswift01 in #246 - Enable Issue Template Picker by Adding Templates and Adding Configuration File by @harryswift01 in #247
- Introduce Table for GitHub Badges by @harryswift01 in #248
- Ensure
CITATION.cffreferences gromacs correctly by @harryswift01 in #250 - Update license copyright year(s) by @github-actions[bot] in #255
- Implement Scheduled CI Runs to Track Upstream AiiDA Changes by @harryswift01 in #254
- Bump peter-evans/create-pull-request from 8.0.0 to 8.1.0 by @dependabot[bot] in #252
- Bump actions/setup-python from 6.1.0 to 6.2.0 by @dependabot[bot] in #251
- Remove dependabot from repository workflow by @harryswift01 in #257
- fix(deps): update dependency pre-commit to v3.8.0 by @renovate[bot] in #260
- fix(deps): update dependency pytest-cov to v7 by @renovate[bot] in #269
- fix(deps): update dependency aiida-core to >=2.7.2,<=2.7.2 by @renovate[bot] in #258
- fix(deps): update dependency markupsafe to <2.2 by @renovate[bot] in #259
- fix(deps): update dependency wheel to v0.46.3 by @renovate[bot] in #264
- fix(deps): update dependency pytest-sugar to v1.1.1 by @renovate[bot] in #263
- fix(deps): update dependency pylint to v3.3.9 by @renovate[bot] in #261
- fix(deps): update dependency pytest to v8.4.2 by @renovate[bot] in #262
- fix(deps): update dependency markupsafe to v3 by @renovate[bot] in #265
- fix(deps): update dependency pre-commit to v4 by @renovate[bot] in #266
- fix(deps): update dependency pytest to v9 by @renovate[bot] in #268
- fix(deps): update dependency pylint to v4 by @renovate[bot] in #267
- fix(deps): update dependency aiida-core to >=2.7.3,<=2.7.3 by @renovate[bot] in #271
- migrate tests to new containers by @jimboid in #231
- Update Renovate configuration to respect manually curated dependency ranges by @harryswift01 in #273
- Include Auto-Approval for Package Release by @harryswift01 in #276
- Update to version 2.1.2 by @github-actions[bot] in #278
- Revert "Update to version 2.1.2" by @harryswift01 in #279
- Update to version 2.1.2 by @github-actions[bot] in #280
New Contributors
- @harryswift01 made their first contribution in #243
- @renovate[bot] made their first contribution in #260
Full Changelog: 2.1.1...2.1.2
v2.1.1
What's Changed
- Enable dependabot by @jimboid in #204
- Bump softprops/action-gh-release from 2.2.2 to 2.3.0 by @dependabot[bot] in #205
- Bump softprops/action-gh-release from 2.3.0 to 2.3.2 by @dependabot[bot] in #206
- Update .readthedocs.yml by @jimboid in #211
- Update python in CI by @jimboid in #210
- Bump softprops/action-gh-release from 2.3.2 to 2.3.3 by @dependabot[bot] in #209
- Bump actions/setup-python from 5.6.0 to 6.0.0 by @dependabot[bot] in #208
- Bump actions/checkout from 4.2.2 to 5.0.0 by @dependabot[bot] in #207
- Limit upper version of aiida by @jimboid in #212
- tidy up by @jimboid in #213
- Bump softprops/action-gh-release from 2.3.3 to 2.3.4 by @dependabot[bot] in #214
- Bump softprops/action-gh-release from 2.3.4 to 2.4.1 by @dependabot[bot] in #216
- migrate paths from PSDI-UK to CCPBioSim by @jimboid in #217
- Fix entry point warning by @jimboid in #218
- Bump actions/setup-python from 6.0.0 to 6.1.0 by @dependabot[bot] in #224
- Bump peter-evans/create-pull-request from 7.0.8 to 7.0.9 by @dependabot[bot] in #223
- Bump actions/checkout from 5.0.0 to 6.0.0 by @dependabot[bot] in #222
- Bump coverallsapp/github-action from 2.3.6 to 2.3.7 by @dependabot[bot] in #220
- Bump softprops/action-gh-release from 2.4.1 to 2.4.2 by @dependabot[bot] in #219
- add aiida classes to nitpick_ignore in docs conf by @jkalayan in #228
- Update to version 2.1.1 by @github-actions[bot] in #229
New Contributors
- @dependabot[bot] made their first contribution in #205
Full Changelog: 2.1.0...2.1.1
v2.1.0
What's Changed
- added path to sphinx conf file by @jkalayan in https://github.com/PSDI-UK/aiida-gromacs/pull/193
- 189 plumed support for mdrun by @jkalayan in https://github.com/PSDI-UK/aiida-gromacs/pull/194
- 195 Breaking Change gmx grompp fails for topology that lists itp files in subdirectories by @jkalayan in https://github.com/PSDI-UK/aiida-gromacs/pull/196
- updated gpcr notebook to work with latest version of vermouth by @jkalayan in https://github.com/PSDI-UK/aiida-gromacs/pull/198
- simplify CI by @jimboid in https://github.com/PSDI-UK/aiida-gromacs/pull/197
- Update to version 2.1.0 by @github-actions in https://github.com/PSDI-UK/aiida-gromacs/pull/200
- Fix for wrong default branch name by @jimboid in https://github.com/PSDI-UK/aiida-gromacs/pull/201
- rollback version to test new release workflow by @jimboid in https://github.com/PSDI-UK/aiida-gromacs/pull/202
- Update to version 2.1.0 by @github-actions in https://github.com/PSDI-UK/aiida-gromacs/pull/203
New Contributors
- @github-actions made their first contribution in https://github.com/PSDI-UK/aiida-gromacs/pull/200
Full Changelog: PSDI-UK/aiida-gromacs@2.0.10...2.1.0
v2.0.10
What's Changed
- Fix GHA release workflow by @jimboid in https://github.com/PSDI-UK/aiida-gromacs/pull/187
- update CI images by @jimboid in https://github.com/PSDI-UK/aiida-gromacs/pull/188
- Docs by @jkalayan in https://github.com/PSDI-UK/aiida-gromacs/pull/190
- Ci update by @jkalayan in https://github.com/PSDI-UK/aiida-gromacs/pull/191
Full Changelog: PSDI-UK/aiida-gromacs@2.0.9...2.0.10
v2.0.9
What's Changed
- Update version to v2.0.8 by @jimboid in https://github.com/PSDI-UK/aiida-gromacs/pull/146
- change CI workflow by @jimboid in https://github.com/PSDI-UK/aiida-gromacs/pull/147
- Update auto-release.yml by @jimboid in https://github.com/PSDI-UK/aiida-gromacs/pull/148
- Implement version checking in CI by @jimboid in https://github.com/PSDI-UK/aiida-gromacs/pull/149
- 136 tutorial for coarse grained simulations by @jkalayan in https://github.com/PSDI-UK/aiida-gromacs/pull/150
- Update CI versions by @jimboid in https://github.com/PSDI-UK/aiida-gromacs/pull/152
- 151 improve docs by @jkalayan in https://github.com/PSDI-UK/aiida-gromacs/pull/153
- 151 improve docs by @jkalayan in https://github.com/PSDI-UK/aiida-gromacs/pull/154
- updated tutorial by @jkalayan in https://github.com/PSDI-UK/aiida-gromacs/pull/155
- updated tutorial by @jkalayan in https://github.com/PSDI-UK/aiida-gromacs/pull/156
- updated tutorial by @jkalayan in https://github.com/PSDI-UK/aiida-gromacs/pull/157
- updated tutorial by @jkalayan in https://github.com/PSDI-UK/aiida-gromacs/pull/158
- updated tutorial by @jkalayan in https://github.com/PSDI-UK/aiida-gromacs/pull/159
- updated tutorial by @jkalayan in https://github.com/PSDI-UK/aiida-gromacs/pull/160
- added mkdir for empty dirs in GPCR tutorial by @jkalayan in https://github.com/PSDI-UK/aiida-gromacs/pull/161
- update test container versioning scheme by @jimboid in https://github.com/PSDI-UK/aiida-gromacs/pull/163
- update CI to new containers by @jimboid in https://github.com/PSDI-UK/aiida-gromacs/pull/164
- Update lysozyme.rst by @HEJ845 in https://github.com/PSDI-UK/aiida-gromacs/pull/165
- changed some versions of tools by @jimboid in https://github.com/PSDI-UK/aiida-gromacs/pull/166
- 151 improve docs by @jkalayan in https://github.com/PSDI-UK/aiida-gromacs/pull/168
- tutorial edits and added code of conduct by @jkalayan in https://github.com/PSDI-UK/aiida-gromacs/pull/169
- updated gpcr tutorial by @jkalayan in https://github.com/PSDI-UK/aiida-gromacs/pull/170
- added link to BioSimDB in lysozyme tutorial by @jkalayan in https://github.com/PSDI-UK/aiida-gromacs/pull/171
- order of aiida intialialisation updated by @jkalayan in https://github.com/PSDI-UK/aiida-gromacs/pull/173
- Ensure python version is 3.11 by @HEJ845 in https://github.com/PSDI-UK/aiida-gromacs/pull/175
- Update tutorial variables by @HEJ845 in https://github.com/PSDI-UK/aiida-gromacs/pull/178
- Update PTH2R_CGMD.rst by @HEJ845 in https://github.com/PSDI-UK/aiida-gromacs/pull/180
- Updates to GPCR Tutorial by @HEJ845 in https://github.com/PSDI-UK/aiida-gromacs/pull/184
- update version from 2.0.8 to 2.0.9 by @jkalayan in https://github.com/PSDI-UK/aiida-gromacs/pull/185
- Fix for pip changes breaking CI by @jimboid in https://github.com/PSDI-UK/aiida-gromacs/pull/186
New Contributors
- @HEJ845 made their first contribution in https://github.com/PSDI-UK/aiida-gromacs/pull/165
Full Changelog: PSDI-UK/aiida-gromacs@v2.0.8...2.0.9
v2.0.8
What's Changed
- Expand CI for matrix based testing by @jimboid in https://github.com/PSDI-UK/aiida-gromacs/pull/124
- migrate repository to PSDI-UK by @jimboid in https://github.com/PSDI-UK/aiida-gromacs/pull/128
- 126 search previous processes by @jkalayan in https://github.com/PSDI-UK/aiida-gromacs/pull/129
- added command node to all gmx_ calculations and added function to pri… by @jkalayan in https://github.com/PSDI-UK/aiida-gromacs/pull/132
- 134 no trr file returned by @jkalayan in https://github.com/PSDI-UK/aiida-gromacs/pull/135
- 137 gmx genion uses hard coded solvent by @jkalayan in https://github.com/PSDI-UK/aiida-gromacs/pull/138
- changed RTD theme to furo by @jkalayan in https://github.com/PSDI-UK/aiida-gromacs/pull/141
- Changes to CI action for autoupdating version numbers by @jimboid in https://github.com/PSDI-UK/aiida-gromacs/pull/143
- removed print_provenance and replaced with: verdi data provance show by @jkalayan in https://github.com/PSDI-UK/aiida-gromacs/pull/144
- attempt to fix CI failure and alter the CI general flow for releasing… by @jimboid in https://github.com/PSDI-UK/aiida-gromacs/pull/145
Full Changelog: PSDI-UK/aiida-gromacs@v2.0.7...v2.0.8