Fix python and dependency versions #40
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Most of our dependencies do not have a version specification. This leads to problems when new users try to install chebai. I made the following changes:
<3.11.8(see c8252b5), now it is set to>=3.9, <3.12since the last3.11version,3.11.9is working fine, but version3.8leads to the errorerror: Parser key "data": 'type' object is not subscriptableduring command parsing<2since version 2 is not yet supported by all dependencies (version 2 of numpy has been released in June 2024)lightning<=2.1to avoid the hyperparameter conflict mentioned here: Protein function prediction with GO #39 (comment) (-> upgrade chebai to the latest lightning version #43 )