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14 Open 298 Closed
14 Open 298 Closed
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Issues list

[BUG] triage For developers to check
#424 opened Feb 27, 2025 by Tang-pro
2 tasks done
5
[BUG] $associated_gene column empty in _classfication.txt and Error in max(isoPerGene$nIso) : invalid 'type' (list) of argument IsoAnnotLite IsoAnnotLite related issues triage For developers to check
#405 opened Feb 10, 2025 by Rosierc
2 tasks done
@pabloati
1
[BUG] duplicate transcript IDs after rescue step rescue SQ3 rescue-related issues triage For developers to check
#402 opened Feb 7, 2025 by ChrissiKalk97
2 tasks done
[BUG] Discrepancy in number of genes triage For developers to check
#382 opened Jan 21, 2025 by linley-sherin
2 tasks done
3
Alternative tools for orf prediction triage For developers to check
#347 opened Nov 8, 2024 by YIGUIz
2 tasks done
sqanti3_rescue - tags transcript_id, gene_id are absent from the attribute field [BUG] rescue SQ3 rescue-related issues
#317 opened Aug 2, 2024 by cathycoutu
2 tasks done
1
Having output of examples check into git is problematic enhancement New feature or request
#276 opened Mar 24, 2024 by diekhans
2 tasks done
BAM/SAM input option enhancement New feature or request
#274 opened Mar 21, 2024 by carolinamonzo
@TianYuan-Liu
1
Alternative tools for orf prediction enhancement New feature or request
#239 opened Nov 6, 2023 by kdm9
1
CDS not annotated using isoAnnotLite IsoAnnotLite IsoAnnotLite related issues question Further information is requested
#230 opened Sep 25, 2023 by Ajay-097
8
Option to write TSV for each report table enhancement New feature or request
#218 opened Aug 24, 2023 by diekhans
3
understanding the dup isoforms in the classification file QC SQ3 Quality Control related issues question Further information is requested
#216 opened Aug 23, 2023 by alexyfyf
2
Provide SQANTI3 as bioconda package enhancement New feature or request Installation Installation-related issues
#180 opened Jan 24, 2023 by caspargross
1
Error in simpleLoess bug Something isn't working QC SQ3 Quality Control related issues
#164 opened Aug 4, 2022 by sum732
3
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